Evidence map›Paper›PMID 23209316›Full record

ArticleThe Journal of experimental medicine2012

Distinct requirements for T-bet in gut innate lymphoid cells.

Giuseppe Sciumé, Kiyoshi Hirahara, Hayato Takahashi, Arian Laurence, Alejandro V Villarino, Kentner L Singleton, Sean P Spencer, Christoph Wilhelm, Amanda C Poholek, Golnaz Vahedi and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 169 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. NKp46Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Divergent roles for STAT4 in shaping differentiation of cytotoxic ILC1 and NK cells during gut inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Article
  8. AFrontiers in immunology · 2023
    Article
  9. ILCs-Crucial Players in Enteric Infectious Diseases.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Review
  12. Article
  13. Innate Lymphoid Cells and Intestinal Inflammatory Disorders.International journal of molecular sciences · 2022
    Review
  14. Mechanistic studies of MALAT1 in respiratory diseases.Frontiers in molecular biosciences · 2022
    Review
  15. Article
  16. Plasticity of Innate Lymphoid Cells in Cancer.Frontiers in immunology · 2022
    Review
  17. Innate Lymphoid Cells and Inflammatory Bowel Disease.Advances in experimental medicine and biology · 2022
    Review
  18. Review
  19. Review
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Giuseppe SciuméLymphocyte Cell Biology Section, Molecular Immunology and Inflammation Branch, National Institute of Arthritis, Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Kiyoshi Hirahara
Hayato Takahashi
Arian Laurence
Alejandro V Villarino
Kentner L Singleton
Sean P Spencer
Christoph Wilhelm
Amanda C Poholek
Golnaz Vahedi
Yuka Kanno
Yasmine Belkaid
John J O'Shea
National Institutes of Health · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · USNational Institute of Allergy and Infectious Diseases · US

Funding

Stat transcription factors in immunoregulation and autoimmune diseaseZIAAR041159 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI O'SHEA, JOHN · 2009 to 2025
$49.3M
Role of tissue resident eosinophils in promoting intestinal immunityF30DK094708 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SPENCER, SEAN PAUL · 2011 to 2013
$101k
Intramural NIH HHSNIDDK NIH HHS F30 DK094708
6 · The paper itself

Abstract

Interleukin (IL)-22-producing innate lymphoid cells (ILCs; ILC22) comprise a heterogeneous population of cells that are dependent on the transcription factor retinoid-related orphan γt (RORγt) and are critical for barrier function of the intestinal mucosa. A distinct ILC22 subset expresses the natural cytotoxicity receptor NKp46 (NKp46+ ILC22); however, the factors that contribute to the generation of this population versus other subsets are largely unknown. Herein, we show that T-bet (encoded by Tbx21) was highly expressed in NKp46+ ILC22, a feature shared by all NKp46+ cells present in the intestine but not by other IL-22-producing populations. Accordingly, the absence of T-bet resulted in loss of NKp46+ ILC22 in the intestinal lamina propria. The residual NKp46+ ILC22 present in Tbx21(-/-) mice showed a marked reduction of Rorγt expression and impairment in IL-22 production. Generation and functions of gut NK1.1+ cells were also altered. Bone marrow chimera experiments revealed a cell-intrinsic requirement for T-bet in these subsets and competitive reconstitution experiments revealed roles for T-bet in multiple ILC subsets. Thus, T-bet has a general importance for ILC in the gut and plays a selective and critical role in the generation of NKp46+ ILC22.

Indexed as

Immunity, InnateAnimalsAntigens, LyCell DifferentiationGene ExpressionInterleukin-22Interleukin-7 Receptor alpha SubunitInterleukinsIntestinal MucosaKiller Cells, NaturalLymphocyte SubsetsMiceMice, Inbred C57BLMice, KnockoutNatural Cytotoxicity Triggering Receptor 1T-bet Transcription FactorAntigens, LyInterleukin-22Interleukin-7 Receptor alpha SubunitInterleukinsNatural Cytotoxicity Triggering Receptor 1Ncr1 protein, mouseT-bet Transcription FactorT-Box Domain Proteins

Identifiers

PMID23209316
PMCPMC3526352
OpenAlexW2164080567

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.