Evidence map›Paper›PMID 23209222›Full record

ArticleJournal of bacteriology2012

Genome sequence of Francisella tularensis subspecies holarctica strain FSC200, isolated from a child with tularemia.

Kerstin Svensson, Andreas Sjödin, Mona Byström, Malin Granberg, Mitchell J Brittnacher, Laurence Rohmer, Michael A Jacobs, Elizabeth H Sims-Day, Ruth Levy, Yang Zhou and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Virulence and genome analysis of three historicalFrontiers in cellular and infection microbiology · 2025
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  8. Reorganized Genomic Taxonomy ofMicroorganisms · 2021
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  9. Genotyping ofMicroorganisms · 2020
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  10. Complete Genome Sequence of Francisella tularensis subsp.Microbiology resource announcements · 2020
    Article
  11. Differences in Blood-derivedMicroorganisms · 2020
    Article
  12. Article
  13. Genetic Diversity and Spatial Segregation ofFrontiers in cellular and infection microbiology · 2019
    Article
  14. Frontiers in cellular and infection microbiology · 2018
    Article
  15. RevisitingFrontiers in microbiology · 2018
    Article
  16. Article
  17. Long-range dispersal movedMicrobial genomics · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 2 countries.

Kerstin SvenssonCBRN Defence and Security, Swedish Defence Research Agency, Umeå, Sweden.
Andreas Sjödin
Mona Byström
Malin Granberg
Mitchell J Brittnacher
Laurence Rohmer
Michael A Jacobs
Elizabeth H Sims-Day
Ruth Levy
Yang Zhou
Hillary S Hayden
Regina Lim
Jean Chang
Donald Guenthener
Allison Kang
Eric Haugen
Will Gillett
Rajinder Kaul
Mats Forsman
Pär Larsson
Anders Johansson
University of Washington · USSwedish Defence Research Agency · SEUmeå University · SE

Funding

Variation in Human Innate ImmunityU54AI057141 · NIAID · UNIVERSITY OF WASHINGTON · PI GREENBERG, EVERETT P · 2003 to 2013
$102.3M
NIAID NIH HHS U54 AI057141
6 · The paper itself

Abstract

Here we report the complete, accurate 1.89-Mb genome sequence of Francisella tularensis subsp. holarctica strain FSC200, isolated in 1998 in the Swedish municipality Ljusdal, which is in an area where tularemia is highly endemic. This genome is important because strain FSC200 has been extensively used for functional and genetic studies of Francisella and is well-characterized.

Indexed as

Genome, BacterialBacterial Typing TechniquesBase SequenceChild, PreschoolDNA, BacterialFemaleFrancisella tularensisHumansMolecular Sequence DataSequence Analysis, DNASwedenTularemiaDNA, Bacterial

Identifiers

PMID23209222
PMCPMC3510583
OpenAlexW2114074804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.