Evidence map›Paper›PMID 23209126›Full record

ArticlePlant physiology2013

Proteome analysis in Arabidopsis reveals shoot- and root-specific targets of cytokinin action and differential regulation of hormonal homeostasis.

Markéta Žd'árská, Pavlína Zatloukalová, Mariana Benítez, Ondrej Šedo, David Potěšil, Ondřej Novák, Jana Svačinová, Bedrich Pešek, Jiří Malbeck, Jana Vašíčková and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
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  9. Hyperhydricity in Plant Tissue Culture.Plants (Basel, Switzerland) · 2022
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  12. International journal of molecular sciences · 2021
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  13. Silencing ofInternational journal of molecular sciences · 2020
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  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Markéta Žd'árskáFunctional Genomics and Proteomics of Plants, Central European Institute of Technology, Masaryk University, CZ-625 00 Brno, Czech Republic.
Pavlína Zatloukalová
Mariana Benítez
Ondrej Šedo
David Potěšil
Ondřej Novák
Jana Svačinová
Bedrich Pešek
Jiří Malbeck
Jana Vašíčková
Zbyněk Zdráhal
Jan Hejátko
Central European Institute of Technology · CZPalacký University Olomouc · CZCzech Academy of Sciences, Institute of Experimental Botany · CZMasaryk University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant hormones cytokinins (CKs) regulate multiple developmental and physiological processes in Arabidopsis (Arabidopsis thaliana). Responses to CKs vary in different organs and tissues (e.g. the response to CKs has been shown to be opposite in shoot and root samples). However, the tissue-specific targets of CKs and the mechanisms underlying such specificity remain largely unclear. Here, we show that the Arabidopsis proteome responds with strong tissue and time specificity to the aromatic CK 6-benzylaminopurine (BAP) and that fast posttranscriptional and/or posttranslational regulation of protein abundance is involved in the contrasting shoot and root proteome responses to BAP. We demonstrate that BAP predominantly regulates proteins involved in carbohydrate and energy metabolism in the shoot as well as protein synthesis and destination in the root. Furthermore, we found that BAP treatment affects endogenous hormonal homeostasis, again with strong tissue specificity. In the shoot, BAP up-regulates the abundance of proteins involved in abscisic acid (ABA) biosynthesis and the ABA response, whereas in the root, BAP rapidly and strongly up-regulates the majority of proteins in the ethylene biosynthetic pathway. This was further corroborated by direct measurements of hormone metabolites, showing that BAP increases ABA levels in the shoot and 1-aminocyclopropane-1-carboxylic acid, the rate-limiting precursor of ethylene biosynthesis, in the root. In support of the physiological importance of these findings, we identified the role of proteins mediating BAP-induced ethylene production, METHIONINE SYNTHASE1 and ACC OXIDASE2, in the early root growth response to BAP.

Indexed as

ArabidopsisArabidopsis ProteinsBenzyl CompoundsCytokininsElectrophoresis, Gel, Two-DimensionalGene Expression ProfilingGene Expression Regulation, PlantHomeostasisKinetinModels, BiologicalModels, GeneticPlant Growth RegulatorsPlant RootsPlant ShootsProteomePurinesArabidopsis ProteinsbenzylaminopurineBenzyl CompoundsCytokininsKinetinPlant Growth RegulatorsProteomePurines

Identifiers

PMID23209126
PMCPMC3561029
OpenAlexW2148065019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.