Evidence map›Paper›PMID 23207902›Full record

ArticleMolecular and cellular biology2013

Scmh1 has E3 ubiquitin ligase activity for geminin and histone H2A and regulates geminin stability directly or indirectly via transcriptional repression of Hoxa9 and Hoxb4.

Shin'ichiro Yasunaga, Motoaki Ohtsubo, Yoshinori Ohno, Keita Saeki, Toshiaki Kurogi, Miki Tanaka-Okamoto, Hiroyoshi Ishizaki, Manabu Shirai, Keichiro Mihara, Hugh W Brock and 2 more

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In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Shin'ichiro YasunagaDepartment of Stem Cell Biology, Research Institute for Radiation Biology and Medicine, Hiroshima University, Hiroshima, Japan.
Motoaki Ohtsubo
Yoshinori Ohno
Keita Saeki
Toshiaki Kurogi
Miki Tanaka-Okamoto
Hiroyoshi Ishizaki
Manabu Shirai
Keichiro Mihara
Hugh W Brock
Jun Miyoshi
Yoshihiro Takihara
Hiroshima University · JPOsaka International Cancer Institute · JPBeppu University · JPNational Cerebral and Cardiovascular Center · JPUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polycomb-group (PcG) complex 1 acts as an E3 ubiquitin ligase both for histone H2A to silence transcription and for geminin to regulate its stability. Scmh1 is a substoichiometric component of PcG complex 1 that provides the complex with an interaction domain for geminin. Scmh1 is unstable and regulated through the ubiquitin-proteasome system, but its molecular roles are unknown, so we generated Scmh1-deficient mice to elucidate its function. Loss of Scmh1 caused derepression of Hoxb4 and Hoxa9, direct targets of PcG complex 1-mediated transcriptional silencing in hematopoietic cells. Double knockdown of Hoxb4 and Hoxa9 or transduction of a dominant-negative Hoxb4N→A mutant caused geminin accumulation. Age-related transcriptional downregulation of derepressed Hoxa9 also leads to geminin accumulation. Transduction of Scmh1 lacking a geminin-binding domain restored derepressed expression of Hoxb4 and Hoxa9 but did not downregulate geminin like full-length Scmh1. Each of Hoxb4 and Hoxa9 can form a complex with Roc1-Ddb1-Cul4a to act as an E3 ubiquitin ligase for geminin. We suggest that geminin dysregulation may be restored by derepressed Hoxb4 and Hoxa9 in Scmh1-deficient mice. These findings suggest that PcG and a subset of Hox genes compose a homeostatic regulatory system for determining expression level of geminin.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCell Cycle ProteinsCell LineDown-RegulationGemininGene Knockout TechniquesGenes, HomeoboxGenetic LociHematopoiesisHistonesHomeodomain ProteinsHumansMiceMice, Inbred C57BLCell Cycle ProteinsGemininGmnn protein, mouseHistoneshomeobox protein HOXA9Homeodomain ProteinsHoxb4 protein, mouseNuclear ProteinsPolycomb-Group ProteinsProteasome Endopeptidase ComplexScmh1 protein, mouseTranscription FactorsUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID23207902
PMCPMC3571339
OpenAlexW2136351367

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.