Evidence map›Paper›PMID 23204518›Full record

ArticleThe Journal of biological chemistry2013

Thrombin-cleaved fragments of osteopontin are overexpressed in malignant glial tumors and provide a molecular niche with survival advantage.

Yasuto Yamaguchi, Zhifei Shao, Shadi Sharif, Xiao-Yan Du, Timothy Myles, Milton Merchant, Griffith Harsh, Michael Glantz, Lawrence Recht, John Morser and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 58 citations in OpenAlex.

  1. Osteopontin in Atrial Fibrillation and Atrial Remodeling.Journal of the American Heart Association · 2026
    Review
  2. Review
  3. Review
  4. Methods to Investigate Thrombin Cleavage of Osteopontin (OPN).Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Frontiers in oncology · 2021
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yasuto YamaguchiDivision of Hematology, Department of Medicine, Stanford University School of Medicine, Stanford, California 94305, USA.
Zhifei Shao
Shadi Sharif
Xiao-Yan Du
Timothy Myles
Milton Merchant
Griffith Harsh
Michael Glantz
Lawrence Recht
John Morser
Lawrence L K Leung
Stanford University · USVA Palo Alto Health Care System · USPenn State Milton S. Hershey Medical Center · US

Funding

T32 Training Program in Mechanisms and Innovation in Vascular DiseaseT32HL098049 · NHLBI · STANFORD UNIVERSITY · PI Nicholas James Leeper, Philip S Tsao · 2010 to 2026
$6.3M
FUNCTIONAL MAPPING AND PROTEIN ENGINEERING OF THROMBINR01HL057530 · NHLBI · STANFORD UNIVERSITY · PI LEUNG, LAWRENCE L · 1999 to 2013
$4.2M
NHLBI NIH HHS HL057530NHLBI NIH HHS R01 HL057530NHLBI NIH HHS T32 HL098049
6 · The paper itself

Abstract

Osteopontin (OPN), which is highly expressed in malignant glioblastoma (GBM), possesses inflammatory activity modulated by proteolytic cleavage by thrombin and plasma carboxypeptidase B2 (CPB2) at a highly conserved cleavage site. Full-length OPN (OPN-FL) was elevated in cerebrospinal fluid (CSF) samples from all cancer patients compared with noncancer patients. However, thrombin-cleaved OPN (OPN-R) and thrombin/CPB2-double-cleaved OPN (OPN-L) levels were markedly increased in GBM and non-GBM gliomas compared with systemic cancer and noncancer patients. Cleaved OPN constituted ∼23 and ∼31% of the total OPN in the GBM and non-GBM CSF samples, respectively. OPN-R was also elevated in GBM tissues. Thrombin-antithrombin levels were highly correlated with cleaved OPN, but not OPN-FL, suggesting that the cleaved OPN fragments resulted from increased thrombin and CPB2 in this extracellular compartment. Levels of VEGF and CCL4 were increased in CSF of GBM and correlated with the levels of cleaved OPN. GBM cell lines were more adherent to OPN-R and OPN-L than OPN-FL. Adhesion to OPN altered gene expression, in particular genes involved with cellular processes, cell cycle regulation, death, and inflammation. OPN and its cleaved forms promoted motility of U-87 MG cells and conferred resistance to apoptosis. Although functional mutation of the RGD motif in OPN largely abolished these functions, OPN(RAA)-R regained significant cell binding and signaling function, suggesting that the SVVYGLR motif in OPN-R may substitute for the RGD motif if the latter becomes inaccessible. OPN cleavage contributes to GBM development by allowing more cells to bind in niches where they acquire anti-apoptotic properties.

Indexed as

Amino Acid SequenceAntithrombin IIIApoptosisBiomarkers, TumorBrain NeoplasmsCell AdhesionCell Line, TumorCell MovementCell SurvivalChemokine CCL3Chemokine CCL4Conserved SequenceGene Expression Regulation, NeoplasticGliomaHumansModels, BiologicalAntithrombin IIIantithrombin III-protease complexarginyl-glycyl-aspartic acidBiomarkers, TumorCCL3 protein, humanCCL4 protein, humanChemokine CCL3Chemokine CCL4OligopeptidesOsteopontinPeptide FragmentsPeptide HydrolasesThrombinVascular Endothelial Growth Factor A

Identifiers

PMID23204518
PMCPMC3561533
OpenAlexW1976007658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.