Evidence map›Paper›PMID 23204460›Full record

ArticleJournal of bacteriology2013

Use of a mariner-based transposon mutagenesis system to isolate Clostridium perfringens mutants deficient in gliding motility.

Hualan Liu, Laurent Bouillaut, Abraham L Sonenshein, Stephen B Melville

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hualan LiuDepartment of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA.
Laurent Bouillaut
Abraham L Sonenshein
Stephen B Melville
Tufts University · USVirginia Tech · US

Funding

Clostridium difficile Toxin Gene RegulationR01AI057637 · NIAID · TUFTS UNIVERSITY BOSTON · PI SONENSHEIN, ABRAHAM LINCOLN · 2005 to 2010
$1.4M
Proteomic Analyses of Clostridium difficile Spore Germination ApparatusR21AI088298 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI HELM, RICHARD, JENSEN, RODERICK V · 2010 to 2011
$410k
NIAID NIH HHS AI088298NIAID NIH HHS R01 AI057637NIAID NIH HHS R21 AI088298NIAID NIH HHS R21 AI101536
6 · The paper itself

Abstract

Clostridium perfringens is an anaerobic Gram-positive pathogen that causes many human and animal diseases, including food poisoning and gas gangrene. C. perfringens lacks flagella but possesses type IV pili (TFP). We have previously shown that C. perfringens can glide across an agar surface in long filaments composed of individual bacteria attached end to end and that two TFP-associated proteins, PilT and PilC, are needed for this. To discover additional gene products that play a role in gliding, we developed a plasmid-based mariner transposon mutagenesis system that works effectively in C. perfringens. More than 10,000 clones were screened for mutants that lacked the ability to move away from the edge of a colony. Twenty-four mutants (0.24%) were identified that fit the criteria. The genes containing insertions that affected gliding motility fell into nine different categories. One gene, CPE0278, which encodes a homolog of the SagA cell wall-dependent endopeptidase, acquired distinct transposon insertions in two independent mutants. sagA mutants were unable to form filaments due to a complete lack of end-to-end connections essential for gliding motility. Complementation of the sagA mutants with a wild-type copy of the gene restored gliding motility. We constructed an in-frame deletion mutation in the sagA gene and found that this mutant had a phenotype similar to those of the transposon mutants. We hypothesize that the sagA mutant strains are unable to form the molecular complexes which are needed to keep the cells in an end-to-end orientation, leading to separation of daughter cells and the inability to carry out gliding motility.

Indexed as

Bacterial ProteinsChromosome MappingChromosomes, BacterialClostridium perfringensDNA-Binding ProteinsDNA Transposable ElementsGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenetic Complementation TestMovementMutagenesisMutationPlasmidsRNA, BacterialRNA, RibosomalTransposasesBacterial ProteinsDNA-Binding ProteinsDNA Transposable Elementsmariner transposasesRNA, BacterialRNA, RibosomalTransposases

Identifiers

PMID23204460
PMCPMC3554012
OpenAlexW2103370296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.