Evidence map›Paper›PMID 23202926›Full record

ReviewInternational journal of molecular sciences2012

Fragment-based screening by protein crystallography: successes and pitfalls.

Zorik Chilingaryan, Zhou Yin, Aaron J Oakley

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Combining MicroED and native mass spectrometry for structural discovery of enzyme-small molecule complexes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
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  9. Conformation-dependent ligand hot spots in the spliceosomal RNA helicase BRR2.Acta crystallographica. Section D, Structural biology · 2023
    Article
  10. Review
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  12. Review
  13. Article
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  15. Review
  16. Article
  17. Review
  18. Review
  19. High-throughput in situ experimental phasing.Acta crystallographica. Section D, Structural biology · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zorik ChilingaryanSchool of Chemistry, University of Wollongong, Northfields Ave, Wollongong 2522, NSW, Australia. aarono@uow.edu.au.
Zhou Yin
Aaron J Oakley
University of Wollongong · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fragment-based drug discovery (FBDD) concerns the screening of low-molecular weight compounds against macromolecular targets of clinical relevance. These compounds act as starting points for the development of drugs. FBDD has evolved and grown in popularity over the past 15 years. In this paper, the rationale and technology behind the use of X-ray crystallography in fragment based screening (FBS) will be described, including fragment library design and use of synchrotron radiation and robotics for high-throughput X-ray data collection. Some recent uses of crystallography in FBS will be described in detail, including interrogation of the drug targets β-secretase, phenylethanolamine N-methyltransferase, phosphodiesterase 4A and Hsp90. These examples provide illustrations of projects where crystallography is straightforward or difficult, and where other screening methods can help overcome the limitations of crystallography necessitated by diffraction quality.

Indexed as

Amyloid Precursor Protein SecretasesBinding SitesCrystallography, X-RayCyclic Nucleotide Phosphodiesterases, Type 4Drug DesignHSP90 Heat-Shock ProteinsPharmaceutical PreparationsPhenylethanolamine N-MethyltransferaseProteinsProtein Structure, TertiaryAmyloid Precursor Protein SecretasesCyclic Nucleotide Phosphodiesterases, Type 4HSP90 Heat-Shock ProteinsPharmaceutical PreparationsPhenylethanolamine N-MethyltransferaseProteins

Identifiers

PMID23202926
PMCPMC3497300
OpenAlexW2106962871

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.