Evidence map›Paper›PMID 23202720›Full record

ArticlePediatric research2013

RT-PCR detection of respiratory pathogens in newborn children admitted to a neonatal medium care unit.

Patrick M Smit, Suzanne M Pronk, Jos C Kaandorp, Olivier Weijer, Fanny N Lauw, Paul H M Smits, Eric C J Claas, Jan W Mulder, Jos H Beijnen, Dees P M Brandjes

Abstract read
In one paragraph

Article in Pediatric research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Impact of respiratory viruses in the neonatal intensive care unit.Journal of perinatology : official journal of the California Perinatal Association · 2018
    Observational
  7. Review
  8. [Rhinovirus: Underestimated pathogens in patients during the neonatal period].Archives de pediatrie : organe officiel de la Societe francaise de pediatrie · 2017
    Article
  9. Article
  10. Review
  11. Defining neonatal sepsis.Current opinion in pediatrics · 2016
    Review
  12. Article
  13. Time for a neonatal-specific consensus definition for sepsis.Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies · 2014
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Patrick M SmitDepartment of Internal Medicine, Slotervaart Hospital, Amsterdam, The Netherlands. patrickmsmit@gmail.com
Suzanne M Pronk
Jos C Kaandorp
Olivier Weijer
Fanny N Lauw
Paul H M Smits
Eric C J Claas
Jan W Mulder
Jos H Beijnen
Dees P M Brandjes

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study aimed to determine the prevalence of respiratory pathogens among newborns admitted to a neonatal medium care unit (NMCU) and to identify clinical predictors.

methodsA 1-y observational study was performed of neonates admitted to an NMCU in Amsterdam, The Netherlands. Nasopharyngeal samples were collected for the detection of respiratory viruses and bacteria by real-time PCR (RT-PCR). Cycle threshold (Ct) values were provided to estimate viral load. Predictors for the presence of study pathogens were identified.

resultsFrom October 2010 through September 2011, 334 neonates (median age 1.3 d, 53.6% male) were included. Overall, 37 respiratory pathogens were detected in 34 children (10.2%): parainfluenza-1 (n = 9), human rhinovirus (n = 7), parainfluenza-3 (n = 6), respiratory syncytial virus (RSV, n = 6), Streptococcus pneumoniae (n = 3), adenovirus (n = 2), human coronavirus (n = 2), influenza A (n = 1), and bocavirus (n = 1). Neonates with higher viral loads (Ct <35; n = 11) were more often clinically ill than those with lower viral loads (Ct ≥35; n = 23). Two variables significantly contributed to the detection of study pathogens: age (odds ratio (OR) 1.21 for each day older; 95% confidence interval 1.12-1.30) and rhinorrhea (OR 6.71; 95% confidence interval 1.54-29.21).

conclusionRespiratory pathogens seem to play a role in neonates admitted to an NMCU. The influence of respiratory pathogen detection on clinical management remains to be determined.

Indexed as

Age FactorsCross InfectionFemaleHumansInfant, NewbornMaleNasopharynxNetherlandsOdds RatioPostnatal CareReal-Time Polymerase Chain ReactionRespiratory Tract InfectionsViral Load

Identifiers

PMID23202720
PMCPMC7086686

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.