Evidence map›Paper›PMID 23202588›Full record

ArticleNature structural & molecular biology2013

Eri1 degrades the stem-loop of oligouridylated histone mRNAs to induce replication-dependent decay.

Kai P Hoefig, Nicola Rath, Gitta A Heinz, Christine Wolf, Jasmin Dameris, Aloys Schepers, Elisabeth Kremmer, K Mark Ansel, Vigo Heissmeyer

Abstract read
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In one paragraph

Article in Nature structural & molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
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  6. Article
  7. ISG20L2: an RNA nuclease regulating T cell activation.Cellular and molecular life sciences : CMLS · 2023
    Article
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  11. Review
  12. Article
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  17. Review
  18. Role of oligouridylation in normal metabolism and regulated degradation of mammalian histone mRNAs.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Article
  19. The role of 3' end uridylation in RNA metabolism and cellular physiology.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Kai P HoefigInstitute of Molecular Immunology, Helmholtz Zentrum München, München, Germany.
Nicola Rath
Gitta A Heinz
Christine Wolf
Jasmin Dameris
Aloys Schepers
Elisabeth Kremmer
K Mark Ansel
Vigo Heissmeyer
Helmholtz Zentrum München · DEUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The exoRNase Eri1 inhibits RNA interference and trims the 5.8S rRNA 3' end. It also binds to the stem-loop of histone mRNAs, but the functional importance of this interaction remains elusive. Histone mRNAs are normally degraded at the end of S phase or after pharmacological inhibition of replication. Both processes are impaired in Eri1-deficient mouse cells, which instead accumulate oligouridylated histone mRNAs. Eri1 trims the mature histone mRNAs by two unpaired nucleotides at the 3' end but stalls close to the double-stranded stem. Upon oligouridylation of the histone mRNA, the Lsm1-7 heteroheptamer recognizes the oligo(U) tail and interacts with Eri1, whose catalytic activity is then able to degrade the stem-loop in a stepwise manner. These data demonstrate how degradation of histone mRNAs is initiated when 3' oligouridylation creates a cis element that enables Eri1 to process the double-stranded stem-loop structure.

Indexed as

Inverted Repeat SequencesAnimalsBiocatalysisCell CycleCells, CulturedExonucleasesExoribonucleasesFemaleHistonesLymphocyte ActivationMiceMice, Inbred C57BLNucleic Acid ConformationOligoribonucleotidesRNA, MessengerRNA Processing, Post-TranscriptionalEri1 protein, mouseExonucleasesExoribonucleasesHistonesOligoribonucleotidesoligo(U)RNA, MessengerRNA, RibosomalUracil Nucleotides

Identifiers

PMID23202588
OpenAlexW2066514893

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.