Evidence map›Paper›PMID 23201972›Full record

ArticleNature neuroscience2013

Allele-specific FKBP5 DNA demethylation mediates gene-childhood trauma interactions.

Torsten Klengel, Divya Mehta, Christoph Anacker, Monika Rex-Haffner, Jens C Pruessner, Carmine M Pariante, Thaddeus W W Pace, Kristina B Mercer, Helen S Mayberg, Bekh Bradley and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 711 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
711citing papers in PubMed, 3 pooled it
37.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

711 citing papers in PubMed, 3 syntheses or guidelines pooled it, 1,414 citations in OpenAlex.

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651 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Torsten KlengelMax Planck Institute of Psychiatry, Munich, Germany. klengel@mpipsykl.mpg.de
Divya Mehta
Christoph Anacker
Monika Rex-Haffner
Jens C Pruessner
Carmine M Pariante
Thaddeus W W Pace
Kristina B Mercer
Helen S Mayberg
Bekh Bradley
Charles B Nemeroff
Florian Holsboer
Christine M Heim
Kerry J Ressler
Theo Rein
Elisabeth B Binder
Emory University · USMax Planck Institute of Psychiatry · DEHoward Hughes Medical Institute · USKing's College London · GBMcGill University · CAUniversity of Miami · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Signal transductionP50MH058922 · NIMH · EMORY UNIVERSITY · PI KINKEAD, BECKY · 1999 to 2008
$21.7M
Neural Substrates of Depression Risk after Child AbuseK01MH073698 · NIMH · EMORY UNIVERSITY · PI HEIM, CHRISTINE M · 2006 to 2010
$642k
European Research Council 281338Howard Hughes Medical InstituteMedical Research Council G108/603Medical Research Council MR/J002739/1NCATS NIH HHS UL1 TR000454NCRR NIH HHS UL1 RR025008NIMH NIH HHS K01 MH073698NIMH NIH HHS K01 MH073698-01NIMH NIH HHS MH071538NIMH NIH HHS MH58922NIMH NIH HHS P50 MH058922
6 · The paper itself

Abstract

Although the fact that genetic predisposition and environmental exposures interact to shape development and function of the human brain and, ultimately, the risk of psychiatric disorders has drawn wide interest, the corresponding molecular mechanisms have not yet been elucidated. We found that a functional polymorphism altering chromatin interaction between the transcription start site and long-range enhancers in the FK506 binding protein 5 (FKBP5) gene, an important regulator of the stress hormone system, increased the risk of developing stress-related psychiatric disorders in adulthood by allele-specific, childhood trauma-dependent DNA demethylation in functional glucocorticoid response elements of FKBP5. This demethylation was linked to increased stress-dependent gene transcription followed by a long-term dysregulation of the stress hormone system and a global effect on the function of immune cells and brain areas associated with stress regulation. This identification of molecular mechanisms of genotype-directed long-term environmental reactivity will be useful for designing more effective treatment strategies for stress-related disorders.

Indexed as

Gene-Environment InteractionGenetic Predisposition to DiseaseAdultCell LineChildChild AbuseCohort StudiesDexamethasoneDNA MethylationFemaleGene Expression RegulationGene FrequencyGenotypeGlucocorticoidsHEK293 CellsHippocampusDexamethasoneGlucocorticoidsHydrocortisoneOrganophosphatesPeptide Elongation Factor 1Tacrolimus Binding Protein 5Tacrolimus Binding Proteinstributyl phosphate

Identifiers

PMID23201972
PMCPMC4136922
OpenAlexW2036194871

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.