Evidence map›Paper›PMID 23201412›Full record

ArticleMethods (San Diego, Calif.)2013

In vitro selection of proteins with desired characteristics using mRNA-display.

C Alexander Valencia, Jianwei Zou, Rihe Liu

Abstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Peptide Aptamers: Innovative Design and Applications in Pathogen Detection.Chembiochem : a European journal of chemical biology · 2026
    Review
  2. Article
  3. Evolving a Peptide: Library Platforms and Diversification Strategies.International journal of molecular sciences · 2019
    Review
  4. Article
  5. Peptide aptamers: development and applications.Current topics in medicinal chemistry · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

C Alexander ValenciaDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA. alexander.valencia@cchmc.org
Jianwei Zou
Rihe Liu

Funding

"Smart" Nanoparticles for Cancer Therapy and ImagingU54CA119343 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JULIANO, RUDOLPH · 2005 to 2009
$18.3M
Translational Nanosystems for Improved Lung Cancer Treatment with Small MoleculesU54CA151652 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DESIMONE, JOSEPH M. · 2010 to 2014
$12.1M
Novel Single Domain Antibodies with Multivalency and MultispecificityR01CA157738 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, RIHE · 2012 to 2016
$1.5M
Identification of Caspase Substrates from Human ProteomeR01NS047650 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, RIHE · 2004 to 2008
$1.4M
Novel Anti-allergic Single-domain Antibody Against IgER21AI092228 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, RIHE · 2011 to 2012
$402k
NCI NIH HHS CA119343NCI NIH HHS CA151652NCI NIH HHS CA157738NCI NIH HHS R01 CA157738NCI NIH HHS U54 CA119343NCI NIH HHS U54 CA151652NIAID NIH HHS AI092228NIAID NIH HHS R21 AI092228NINDS NIH HHS NS047650NINDS NIH HHS R01 NS047650
6 · The paper itself

Abstract

mRNA-display is an amplification-based, iterative rounds of in vitro protein selection technique that circumvents a number of difficulties associated with yeast two-hybrid and phage display. Because of the covalent linkage between the genotype and the phenotype, mRNA-display provides a powerful means for reading and amplifying a peptide or protein sequence after it has been selected from a library with very high diversity. The purpose of this article is to provide a summary of the field and practical framework of mRNA-display-based selections. We summarize the advantages and limitations of selections using mRNA-display as well as the recent applications, namely, the identification of novel affinity reagents, target-binding partners, and enzyme substrates from synthetic peptide or natural proteome libraries. Practically, we provide a detailed procedure for performing mRNA-display-based selections with the aim of identifying protease substrates and binding partners of a target protein. Furthermore, we describe how to confirm the function of the selected protein sequences by biochemical assays and bioinformatic tools.

Indexed as

Peptide LibraryHydrogen-Ion ConcentrationProtein BindingProteinsRNA, MessengerPeptide LibraryProteinsRNA, Messenger

Identifiers

PMID23201412
PMCPMC3877681

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.