Evidence map›Paper›PMID 23201122›Full record

ArticleMolecular cell2013

Histone acetylation regulates intracellular pH.

Matthew A McBrian, Iman Saramipoor Behbahan, Roberto Ferrari, Trent Su, Ta-Wei Huang, Kunwu Li, Candice S Hong, Heather R Christofk, Maria Vogelauer, David B Seligson and 1 more

Abstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Interplay Between Glucose Metabolism and Chromatin Modifications in Cancer.Frontiers in cell and developmental biology · 2021
    Pooled it
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  17. Control of Inflammatory Response by Tissue Microenvironment.bioRxiv : the preprint server for biology · 2025
    Article
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  19. Review
  20. Article

95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Matthew A McBrianDepartment of Biological Chemistry, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Iman Saramipoor Behbahan
Roberto Ferrari
Trent Su
Ta-Wei Huang
Kunwu Li
Candice S Hong
Heather R Christofk
Maria Vogelauer
David B Seligson
Siavash K Kurdistani

Funding

A Blueprint for Oncogenic Epigenetic ReprogrammingDP2OD006516 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KURDISTANI, SIAVASH · 2009 to 2009
$2.3M
Howard Hughes Medical InstituteNIH HHS DP2 OD006516
6 · The paper itself

Abstract

Differences in global levels of histone acetylation occur in normal and cancer cells, although the reason why cells regulate these levels has been unclear. Here we demonstrate a role for histone acetylation in regulating intracellular pH (pH(i)). As pH(i) decreases, histones are globally deacetylated by histone deacetylases (HDACs), and the released acetate anions are coexported with protons out of the cell by monocarboxylate transporters (MCTs), preventing further reductions in pH(i). Conversely, global histone acetylation increases as pH(i) rises, such as when resting cells are induced to proliferate. Inhibition of HDACs or MCTs decreases acetate export and lowers pH(i), particularly compromising pH(i) maintenance in acidic environments. Global deacetylation at low pH is reflected at a genomic level by decreased abundance and extensive redistribution of acetylation throughout the genome. Thus, acetylation of chromatin functions as a rheostat to regulate pH(i) with important implications for mechanism of action and therapeutic use of HDAC inhibitors.

Indexed as

Protein Processing, Post-TranslationalAcetatesAcetylationCarbohydrate MetabolismChromatinGene Expression RegulationGlucoseGlutamineHeLa CellsHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHumansHydrogen-Ion ConcentrationHydroxamic AcidsIntracellular FluidAcetatesChromatinGlucoseGlutamineHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHydroxamic AcidsMonocarboxylic Acid TransportersNiacinamidePyruvic Acidtrichostatin A

Identifiers

PMID23201122
PMCPMC3893119

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.