Evidence map›Paper›PMID 23200660›Full record

ArticleFood microbiology2013

Utilization of galactooligosaccharides by Bifidobacterium longum subsp. infantis isolates.

Daniel Garrido, Santiago Ruiz-Moyano, Rogelio Jimenez-Espinoza, Hyun-Ju Eom, David E Block, David A Mills

3 registry-linked trialsOpen access · greenAbstract read
In one paragraph

Article in Food microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 3 registered trials, which are not on this map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01817127 active not recruitingnot on this map

Functional Deconstruction of Human Milk Oligosaccharides and Lipids

TypeobservationalSponsorUniversity of California, DavisRan2009 to 2028Enrolled395ConditionsHealthy, Gestational Diabetes Mellitus, Type 2 Diabetes Mellitus
NCT02457338 naactive not recruitingnot on this mapstarted 2014, after this paper: background citation

Infant Supplementation With Probiotic Bifidobacterium Longum Subsp. Infantis Study

TypeinterventionalSponsorUniversity of California, DavisRan2014 to 2027Enrolled120ConditionsHealthyArmsBifidobacterium
NCT03222804 nawithdrawnnot on this mapstarted 2017, after this paper: background citation

Establishing a Milk Oriented Microbiota in Healthy Term Infants

TypeinterventionalSponsorUniversity of California, DavisRan2017 to 2017Enrolled0ConditionsMicrobial ColonizationArmsBifidobacterium
3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
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  5. Article
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  8. Article
  9. SynergisticMicrobiome research reports · 2024
    Review
  10. Review
  11. Beneficial Effects of ProbioticInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. International journal of molecular sciences · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Daniel GarridoDepartment of Food Science and Technology, University of California Davis, Davis, CA 95616, USA.
Santiago Ruiz-Moyano
Rogelio Jimenez-Espinoza
Hyun-Ju Eom
David E Block
David A Mills
University of California, Davis · US

Funding

Mechanism of Activation of Probiotic Bifidobacteria by Prebiotic Milk GlycansR01AT007079 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2012 to 2016
$2.2M
Oligosaccharides as antimicrobials and prebioticsR01HD065122 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, XI · 2010 to 2013
$1.8M
Structures, Functions, & Genetic Diversity of Oligosaccharides in MilkR01HD061923 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LEBRILLA, CARLITO B · 2009 to 2013
$1.6M
NCCIH NIH HHS R01 AT007079NCCIH NIH HHS R01AT007079NICHD NIH HHS R01 HD061923NICHD NIH HHS R01HD061923NICHD NIH HHS R01 HD065122
6 · The paper itself

Abstract

Prebiotics are non-digestible substrates that stimulate the growth of beneficial microbial populations in the intestine, especially Bifidobacterium species. Among them, fructo- and galacto-oligosaccharides are commonly used in the food industry, especially as a supplement for infant formulas. Mechanistic details on the enrichment of bifidobacteria by these prebiotics are important to understand the effects of these dietary interventions. In this study the consumption of galactooligosaccharides was studied for 22 isolates of Bifidobacterium longum subsp. infantis, one of the most representative species in the infant gut microbiota. In general all isolates showed a vigorous growth on these oligosaccharides, but consumption of larger galactooligosaccharides was variable. Bifidobacterium infantis ATCC 15697 has five genes encoding β-galactosidases, and three of them were induced during bacterial growth on commercial galactooligosaccharides. Recombinant β-galactosidases from B. infantis ATCC 15697 displayed different preferences for β-galactosides such as 4' and 6'-galactobiose, and four β-galactosidases in this strain released monosaccharides from galactooligosaccharides. Finally, we determined the amounts of short chain fatty acids produced by strain ATCC 15697 after growth on different prebiotics. We observed that biomass and product yields of substrate were higher for lactose and galactooligosaccharides, but the amount of acids produced per cell was larger after growth on human milk oligosaccharides. These results provide a molecular basis for galactooligosaccharide consumption in B. infantis, and also represent evidence for physiological differences in the metabolism of prebiotics that might have a differential impact on the host.

Indexed as

Bacterial Proteinsbeta-GalactosidaseBifidobacteriumGastrointestinal TractHumansOligosaccharidesPrebioticsBacterial Proteinsbeta-GalactosidaseOligosaccharidesPrebiotics

Identifiers

PMID23200660
PMCPMC3593662
OpenAlexW1986245298

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.