Evidence map›Paper›PMID 23193439›Full record

ArticleScientific reports2012

Transcription activator-like effector hybrids for conditional control and rewiring of chromosomal transgene expression.

Yi Li, Richard Moore, Michael Guinn, Leonidas Bleris

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Recent developments and applications of genetic transformation and genome editing technologies in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genome-Editing Technologies: Principles and Applications.Cold Spring Harbor perspectives in biology · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Discriminating direct and indirect connectivities in biological networks.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yi LiBioengineering Department, The University of Texas at Dallas , 800 West Campbell Road, Richardson, TX 75080, USA.
Richard Moore
Michael Guinn
Leonidas Bleris
The University of Texas at Dallas · US

Funding

Reverse Engineering of Direct versus Indirect Effects in Biological PathwaysR21GM098984 · NIGMS · UNIVERSITY OF TEXAS DALLAS · PI BLERIS, LEONIDAS · 2011 to 2012
$395k
Rewiring the miRNA-MDM2-p53 network to reactivate p53 functionR21CA170018 · NCI · UNIVERSITY OF TEXAS DALLAS · PI BLERIS, LEONIDAS, MA, LAN · 2012 to 2013
$354k
NCI NIH HHS R21 CA170018NIGMS NIH HHS 1R21GM098984NIGMS NIH HHS R21 GM098984
6 · The paper itself

Abstract

The ability to conditionally rewire pathways in human cells holds great therapeutic potential. Transcription activator-like effectors (TALEs) are a class of naturally occurring specific DNA binding proteins that can be used to introduce targeted genome modifications or control gene expression. Here we present TALE hybrids engineered to respond to endogenous signals and capable of controlling transgenes by applying a predetermined and tunable action at the single-cell level. Specifically, we first demonstrate that combinations of TALEs can be used to modulate the expression of stably integrated genes in kidney cells. We then introduce a general purpose two-hybrid approach that can be customized to regulate the function of any TALE either using effector molecules or a heterodimerization reaction. Finally, we demonstrate the successful interface of TALEs to specific endogenous signals, namely hypoxia signaling and microRNAs, essentially closing the loop between cellular information and chromosomal transgene expression.

Indexed as

Gene Expression RegulationTransgenesCell LineChimeraDoxycyclineGenetic EngineeringHumansHypoxia-Inducible Factor 1, alpha SubunitMicroRNAsPromoter Regions, GeneticProtein EngineeringRecombinant Fusion ProteinsResponse ElementsDoxycyclineHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitMicroRNAsMIRN16 microRNA, humanMIRN17 microRNA, humanRecombinant Fusion Proteins

Identifiers

PMID23193439
PMCPMC3508452
OpenAlexW1995790943

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.