Evidence map›Paper›PMID 23193016›Full record

Trial reportEnvironmental and molecular mutagenesis2013

Methylation alterations at imprinted genes detected among long-term shiftworkers.

Daniel I Jacobs, Johnni Hansen, Alan Fu, Richard G Stevens, Anne Tjonneland, Ulla B Vogel, Tongzhang Zheng, Yong Zhu

Abstract readRandomized Controlled Trial
In one paragraph

Trial report in Environmental and molecular mutagenesis, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Epigenetics and Pregnancy: Conditional Snapshot or Rolling Event.International journal of molecular sciences · 2022
    Review
  5. Article
  6. Shift work, DNA methylation and epigenetic age.International journal of epidemiology · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Altered genome-wide methylation in endometriosis.Reproductive sciences (Thousand Oaks, Calif.) · 2014
    Article
  18. Article
  19. Epigenetics of sleep and chronobiology.Current neurology and neuroscience reports · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniel I JacobsDepartment of Environmental Health Sciences, Yale School of Public Health, New Haven, Connecticut 06520, USA.
Johnni Hansen
Alan Fu
Richard G Stevens
Anne Tjonneland
Ulla B Vogel
Tongzhang Zheng
Yong Zhu

Funding

Can shift-work shift epigenetic changes?R21ES018915 · NIEHS · YALE UNIVERSITY · PI ZHU, YONG · 2010 to 2011
$443k
NIEHS NIH HHS ES018915NIEHS NIH HHS R21 ES018915
6 · The paper itself

Abstract

Exposure to light at night through shiftwork has been linked to alterations in DNA methylation and increased risk of cancer development. Using an Illumina Infinium Methylation Assay, we analyzed methylation levels of 397 CpG sites in the promoter regions of 56 normally imprinted genes to investigate whether shiftwork is associated with alteration of methylation patterns. Methylation was significantly higher at 20 CpG sites and significantly lower at 30 CpG sites (P < 0.05) in 10 female long-term shiftworkers as compared to 10 female age- and folate intake-matched day workers. The strongest evidence for altered methylation patterns in shiftworkers was observed for DLX5, IGF2AS, and TP73 based on the magnitude of methylation change and consistency in the direction of change across multiple CpG sites, and consistent results were observed using quantitative DNA methylation analysis. We conclude that long-term shiftwork may alter methylation patterns at imprinted genes, which may be an important mechanism by which shiftwork has carcinogenic potential and warrants further investigation.

Indexed as

DNA MethylationGenomic ImprintingWork Schedule ToleranceCpG IslandsDNA-Binding ProteinsFemaleHomeodomain ProteinsHumansLightMiddle AgedNeoplasmsNuclear ProteinsPromoter Regions, GeneticProteinsRiskSurveys and QuestionnairesDLX5 protein, humanDNA-Binding ProteinsHomeodomain ProteinsIGF2-AS lncRNA, humanNuclear ProteinsProteinsTP73 protein, humanTranscription FactorsTumor Protein p73Tumor Suppressor Proteins

Identifiers

PMID23193016
PMCPMC4993623

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.