Evidence map›Paper›PMID 23190424›Full record

ArticleNano letters2012

Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia.

Alex K Shalek, Jellert T Gaublomme, Lili Wang, Nir Yosef, Nicolas Chevrier, Mette S Andersen, Jacob T Robinson, Nathalie Pochet, Donna Neuberg, Rona S Gertner and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Nano letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Just a little prick: careful cell contacts enabled by ceramic nanostraws.Pflugers Archiv : European journal of physiology · 2026
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Protection of Si Nanowires against AMolecules (Basel, Switzerland) · 2024
    Article
  8. Natural Killer Cell Mechanosensing in Solid Tumors.Bioengineering (Basel, Switzerland) · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Advanced tools and methods for single-cell surgery.Microsystems & nanoengineering · 2022
    Review
  17. Fluorescent Biosensors Based on Silicon Nanowires.Nanomaterials (Basel, Switzerland) · 2021
    Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Alex K ShalekDepartment of Chemistry, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, United States.
Jellert T Gaublomme
Lili Wang
Nir Yosef
Nicolas Chevrier
Mette S Andersen
Jacob T Robinson
Nathalie Pochet
Donna Neuberg
Rona S Gertner
Ido Amit
Jennifer R Brown
Nir Hacohen
Aviv Regev
Catherine J Wu
Hongkun Park
Broad Institute · US

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ONDERDONK, ANDREW B. · 2003 to 2013
$113.7M
Center for Cell CircuitsP50HG006193 · NHGRI · BROAD INSTITUTE, INC. · PI REGEV, AVIV · 2011 to 2015
$15.6M
Personal tumor neoantigens for immunity against chronic lymphocytic leukemiaR01CA155010 · NCI · DANA-FARBER CANCER INST · PI Catherine Ju-Ying Wu · 2011 to 2026
$9.6M
Nano- and Microelectronic Tools for Interrogating Neuronal Circuits and NetworksDP1OD003893 · OD · HARVARD UNIVERSITY · PI PARK, HONGKUN · 2008 to 2011
$3.3M
Revealing pathogen-sensing pathways using RNAi librariesDP2OD002230 · OD · MASSACHUSETTS GENERAL HOSPITAL · PI HACOHEN, NIR · 2007 to 2007
$2.6M
Post-transplant vaccines to enhance graft-versus-leukemia responsesR01HL103532 · NHLBI · DANA-FARBER CANCER INST · PI WU, CATHERINE JU-YING · 2010 to 2013
$1.7M
Nano- and Microelectronic Tools for Interrogating Neuronal Circuits and NetworksDP1DA035083 · NIDA · HARVARD UNIVERSITY · PI PARK, HONGKUN · 2012 to 2012
$832k
NCI NIH HHS 1R01CA155010-01A1NCI NIH HHS R01 CA155010NHGRI NIH HHS 1P50HG006193-01NHGRI NIH HHS P50 HG006193NHLBI NIH HHS 1R01HL103532-01NHLBI NIH HHS R01 HL103532NIAID NIH HHS U54 AI057159NIDA NIH HHS DP1 DA035083NIH HHS 5DP1OD003893-03NIH HHS DP1 OD003893NIH HHS DP2 OD002230
6 · The paper itself

Abstract

A circuit level understanding of immune cells and hematological cancers has been severely impeded by a lack of techniques that enable intracellular perturbation without significantly altering cell viability and function. Here, we demonstrate that vertical silicon nanowires (NWs) enable gene-specific manipulation of diverse murine and human immune cells with negligible toxicity. To illustrate the power of the technique, we then apply NW-mediated gene silencing to investigate the role of the Wnt signaling pathway in chronic lymphocytic leukemia (CLL). Remarkably, CLL-B cells from different patients exhibit tremendous heterogeneity in their response to the knockdown of a single gene, LEF1. This functional heterogeneity defines three distinct patient groups not discernible by conventional CLL cytogenetic markers and provides a prognostic indicator for patients' time to first therapy. Analyses of gene expression signatures associated with these functional patient subgroups reveal unique insights into the underlying molecular basis for disease heterogeneity. Overall, our findings suggest a functional classification that can potentially guide the selection of patient-specific therapies in CLL and highlight the opportunities for nanotechnology to drive biological inquiry.

Indexed as

AnimalsB-LymphocytesCells, CulturedHumansLeukemia, Lymphocytic, Chronic, B-CellLymphoid Enhancer-Binding Factor 1MiceNanowiresRNA InterferenceRNA, Small InterferingSiliconLymphoid Enhancer-Binding Factor 1RNA, Small InterferingSilicon

Identifiers

PMID23190424
PMCPMC3573729
OpenAlexW1559872368

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.