Evidence map›Paper›PMID 23188805›Full record

ArticlePlant physiology2013

Functional divergence of the glutathione S-transferase supergene family in Physcomitrella patens reveals complex patterns of large gene family evolution in land plants.

Yan-Jing Liu, Xue-Min Han, Lin-Ling Ren, Hai-Ling Yang, Qing-Yin Zeng

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 165 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Article
  9. Overlooked and misunderstood: can glutathione conjugates be clues to understanding plant glutathione transferases?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  10. Genome-Wide Identification of Glutathione S-Transferase Family fromInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. PgMYB1 Positively Regulates Anthocyanin Accumulation by ActivatingInternational journal of molecular sciences · 2023
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. AtGSTU19 and AtGSTU24 as Moderators of the Response ofInternational journal of molecular sciences · 2022
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yan-Jing LiuState Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Xue-Min Han
Lin-Ling Ren
Hai-Ling Yang
Qing-Yin Zeng
Beijing Forestry University · CNInstitute of Botany · CNChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant glutathione S-transferases (GSTs) are multifunctional proteins encoded by a large gene family that play major roles in the detoxification of xenobiotics and oxidative stress metabolism. To date, studies on the GST gene family have focused mainly on vascular plants (particularly agricultural plants). In contrast, little information is available on the molecular characteristics of this large gene family in nonvascular plants. In addition, the evolutionary patterns of this family in land plants remain unclear. In this study, we identified 37 GST genes from the whole genome of the moss Physcomitrella patens, a nonvascular representative of early land plants. The 37 P. patens GSTs were divided into 10 classes, including two new classes (hemerythrin and iota). However, no tau GSTs were identified, which represent the largest class among vascular plants. P. patens GST gene family members showed extensive functional divergence in their gene structures, gene expression responses to abiotic stressors, enzymatic characteristics, and the subcellular locations of the encoded proteins. A joint phylogenetic analysis of GSTs from P. patens and other higher vascular plants showed that different class GSTs had distinct duplication patterns during the evolution of land plants. By examining multiple characteristics, this study revealed complex patterns of evolutionary divergence among the GST gene family in land plants.

Indexed as

CytosolEvolution, MolecularMultigene FamilyAmino Acid SequenceBryopsidaCell NucleusEmbryophytaGene DuplicationGenetic VariationGlutathione TransferaseGreen Fluorescent ProteinsIsoenzymesMicroscopy, ConfocalModels, GeneticModels, MolecularMolecular Sequence DataGlutathione TransferaseGreen Fluorescent ProteinsIsoenzymesPlant Proteins

Identifiers

PMID23188805
PMCPMC3561018
OpenAlexW1963629833

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.