Evidence map›Paper›PMID 23188729›Full record

ArticleInvestigative ophthalmology & visual science2013

Epigenetic regulation of CXCR4 expression by the ocular microenvironment.

Haochuan Li, Jerry Y Niederkorn, Leila Sadegh, Jessamee Mellon, Peter W Chen

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Epigenetics in ocular diseases.Current genomics · 2013
    Article
  6. Developments in Ocular Genetics: 2013 Annual Review.Asia-Pacific journal of ophthalmology (Philadelphia, Pa.)
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Haochuan LiDepartment of Ophthalmology, The University of Texas Southwestern Medical Center, Dallas, Texas 75390-9057, USA.
Jerry Y Niederkorn
Leila Sadegh
Jessamee Mellon
Peter W Chen

Funding

IMMUNOLOGICAL MODULATION OF OCULAR TUMOR METASTASISR01CA030276 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI NIEDERKORN, JERRY · 1985 to 2017
$4.3M
Core Grant for Vision ResearchP30EY020799 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI NIEDERKORN, JERRY · 2010 to 2016
$4.1M
Epigenetic Gene Regulation by the Ocular EnvironmentR01EY017198 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, PETER · 2007 to 2011
$1.8M
IMMUNOLOGICAL MODULATION OF OCULAR TUMOR METASTASESR37CA030276 · NCI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI NIEDERKORN, JERRY · 1995 to 2001
$637k
NCI NIH HHS CA30276NCI NIH HHS R01 CA030276NCI NIH HHS R37 CA030276NEI NIH HHS EY017198NEI NIH HHS EY020799NEI NIH HHS P30 EY020799NEI NIH HHS R01 EY017198
6 · The paper itself

Abstract

purposeExpression of the chemokine receptor CXCR4 by tumors is associated with metastatic migration and invasion of tumor cells. The importance of CXCR4 expression by uveal melanomas in metastasis to the liver was recently demonstrated when injection of CXCR4-negative uveal melanoma cells into mice resulted in reduced liver metastasis compared with CXCR4-positive uveal melanoma cells. Factors in the eye can induce downregulation of genes by epigenetic mechanisms. This study examined whether epigenetic regulation by the ocular environment induced downregulation of CXCR4 expression.

methodsLS174T colon cancer cells were injected in the anterior chamber (AC), subcutaneously (SC), or in the spleen capsule to induce liver metastasis in immune-deficient mice. CXCR4 gene transcription was analyzed by RT-PCR, and protein expression was determined by flow cytometry. Methyltransferase and histone deacetylase activities were determined by ELISA. Treatment with either 5-Aza-2-deoxycytidine (5-Aza) or trichostatin A (TSA) was used to induce demethylation or inhibit histone deacetylases, respectively.

resultsAC-derived LS174T cells showed lower CXCR4 gene expression compared with SC-, liver-derived, or wild-type tumor cells. AC-derived LS174T tumor cells expressed methyltransferase activity compared with SC-, liver-derived, and wild-type tumor cells. Deacetylase activity was elevated in AC-derived LS174T tumor cells compared with SC-derived, liver-derived, and wild-type tumor cells. Treatment of AC-derived LS174T tumor cells with 5-Aza upregulated CXCR4 expression. TSA treatment did not restore CXCR4 expression.

conclusionsThese studies demonstrate that ocular microenvironment factors induce methylation and downregulation of tumor CXCR4 expression.

Indexed as

Epigenesis, GeneticAnimalsAnterior ChamberAntimetabolites, AntineoplasticAzacitidineCecumCell Line, TumorDecitabineDown-RegulationFlow CytometryGene ExpressionGene Expression Regulation, NeoplasticHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHydroxamic AcidsAntimetabolites, AntineoplasticAzacitidineCXCR4 protein, mouseDecitabineHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHydroxamic AcidsLysineReceptors, CXCR4trichostatin A

Identifiers

PMID23188729
PMCPMC3544529

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.