Evidence map›Paper›PMID 23186544›Full record

ArticleNano letters2012

Nanoscale squeezing in elastomeric nanochannels for single chromatin linearization.

Toshiki Matsuoka, Byoung Choul Kim, Jiexi Huang, Nicholas Joseph Douville, M D Thouless, Shuichi Takayama

Abstract read
In one paragraph

Article in Nano letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Single molecule and single cell epigenomics.Methods (San Diego, Calif.) · 2015
    Review
  11. Article
  12. Article
  13. Elevating sampling.Lab on a chip · 2014
    Article
  14. Article
  15. Article
  16. The Control of Crack Arrays in Thin Films.Journal of materials science · 2014
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Toshiki MatsuokaDepartment of Biomedical Engineering, College of Engineering, University of Michigan, 2800 Plymouth Road, Ann Arbor, Michigan 48109, United States.
Byoung Choul Kim
Jiexi Huang
Nicholas Joseph Douville
M D Thouless
Shuichi Takayama

Funding

Active Nanofluidics for Analysis of Chromatin and Genomic DNA StructuresR01HG004653 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TAKAYAMA, SHUICHI · 2008 to 2010
$1.3M
NHGRI NIH HHS HG004653-03NHGRI NIH HHS R01 HG004653
6 · The paper itself

Abstract

This paper describes a novel nanofluidic phenomenon where untethered DNA and chromatin are linearized by rapidly narrowing an elastomeric nanochannel filled with solutions of the biopolymers. This nanoscale squeezing procedure generates hydrodynamic flows while also confining the biopolymers into smaller and smaller volumes. The unique features of this technique enable full linearization then trapping of biopolymers such as DNA. The versatility of the method is also demonstrated by analysis of chromatin stretchability and mapping of histone states using single strands of chromatin.

Indexed as

ChromatinDNAElastomersHeLa CellsHumansNanostructuresNanotechnologyPolymersChromatinDNAelastomeric polymerElastomersPolymers

Identifiers

PMID23186544
PMCPMC3522175

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.