Evidence map›Paper›PMID 23185021›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Synthetic spatially graded Rac activation drives cell polarization and movement.

Benjamin Lin, William R Holmes, C Joanne Wang, Tasuku Ueno, Andrew Harwell, Leah Edelstein-Keshet, Takanari Inoue, Andre Levchenko

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Methods for Controlling Small GTPase Activity.Chembiochem : a European journal of chemical biology · 2025
    Review
  3. Article
  4. Article
  5. Optogenetic Signaling Activation in Zebrafish Embryos.Journal of visualized experiments : JoVE · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Computational modeling of single-cell mechanics and cytoskeletal mechanobiology.Wiley interdisciplinary reviews. Systems biology and medicine · 2018
    Review
  15. Mechanisms of Cell Polarization.Current opinion in systems biology · 2017
    Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Benjamin LinDepartment of Biomedical Engineering, Institute for Cell Engineering, Johns Hopkins University, Baltimore, MD 21205, USA.
William R Holmes
C Joanne Wang
Tasuku Ueno
Andrew Harwell
Leah Edelstein-Keshet
Takanari Inoue
Andre Levchenko
Johns Hopkins University · USJohns Hopkins Medicine · USUniversity of British Columbia · CAUniversity of California, Irvine · US

Funding

Information tranfer in NF-kappaB and MAPK pathwaysR01GM072024 · NIGMS · YALE UNIVERSITY · PI LEVCHENKO, ANDRE · 2004 to 2019
$3.9M
Feedback and Crosstalk in Eukaryotic Chemotaxis- Administrative SupplementR01GM092930 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI INOUE, TAKANARI · 2010 to 2015
$1.6M
An Integrative Analysis of MAPK Signaling in Budding YeastR01GM084332 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI LEVCHENKO, ANDRE · 2008 to 2011
$1.2M
NCI NIH HHS CA15578NIGMS NIH HHS GM072024NIGMS NIH HHS GM084332NIGMS NIH HHS GM092930NIGMS NIH HHS R01 GM072024NIGMS NIH HHS R01 GM084332NIGMS NIH HHS R01 GM092930
6 · The paper itself

Abstract

Migrating cells possess intracellular gradients of active Rho GTPases, which serve as central hubs in transducing signals from extracellular receptors to cytoskeletal and adhesive machinery. However, it is unknown whether shallow exogenously induced intracellular gradients of Rho GTPases are sufficient to drive cell polarity and motility. Here, we use microfluidic control to generate gradients of a small molecule and thereby directly induce linear gradients of active, endogenous Rac without activation of chemotactic receptors. Gradients as low as 15% were sufficient not only to trigger cell migration up the chemical gradient but to induce both cell polarization and repolarization. Cellular response times were inversely proportional to the steepness of Rac inducer gradient in agreement with a mathematical model, suggesting a function for chemoattractant gradient amplification upstream of Rac. Increases in activated Rac levels beyond a well-defined threshold augmented polarization and decreased sensitivity to the imposed gradient. The threshold was governed by initial cell polarity and PI3K activity, supporting a role for both in defining responsiveness to Rac activation. Our results reveal that Rac can serve as a starting point in defining cell polarity. Furthermore, our methodology may serve as a template to investigate processes regulated by intracellular signaling gradients.

Indexed as

Cell MovementCell PolarityEnzyme ActivationHeLa CellsHumansModels, BiologicalPhosphatidylinositol 3-KinasesProtein Multimerizationrac GTP-Binding ProteinsSirolimusTime FactorsPhosphatidylinositol 3-Kinasesrac GTP-Binding ProteinsSirolimus

Identifiers

PMID23185021
PMCPMC3535611
OpenAlexW1988289255

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.