Evidence map›Paper›PMID 23184936›Full record

ArticleThe Journal of biological chemistry2013

Dissecting stop transfer versus conservative sorting pathways for mitochondrial inner membrane proteins in vivo.

Kwangjin Park, Salomé Calado Botelho, Joonki Hong, Marie Österberg, Hyun Kim

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Targeting and Insertion of Membrane Proteins in Mitochondria.Frontiers in cell and developmental biology · 2021
    Review
  4. Review
  5. Review
  6. Mitochondrial proteins: from biogenesis to functional networks.Nature reviews. Molecular cell biology · 2019
    Review
  7. Plant Mitochondrial Inner Membrane Protein Insertion.International journal of molecular sciences · 2018
    Review
  8. Review
  9. Molecular insights into theThe Journal of biological chemistry · 2017
    Article
  10. Article
  11. Article
  12. Role of membrane contact sites in protein import into mitochondria.Protein science : a publication of the Protein Society · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kwangjin ParkSchool of Biological Sciences, Seoul National University, Building 504-421, Seoul 151-747, South Korea.
Salomé Calado Botelho
Joonki Hong
Marie Österberg
Hyun Kim

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial inner membrane proteins that carry an N-terminal presequence are sorted by one of two pathways: stop transfer or conservative sorting. However, the sorting pathway is known for only a small number of proteins, in part due to the lack of robust experimental tools with which to study. Here we present an approach that facilitates determination of inner membrane protein sorting pathways in vivo by fusing a mitochondrial inner membrane protein to the C-terminal part of Mgm1p containing the rhomboid cleavage region. We validated the Mgm1 fusion approach using a set of proteins for which the sorting pathway is known, and determined sorting pathways of inner membrane proteins for which the sorting mode was previously uncharacterized. For Sdh4p, a multispanning membrane protein, our results suggest that both conservative sorting and stop transfer mechanisms are required for insertion. Furthermore, the sorting process of Mgm1 fusion proteins was analyzed under different growth conditions and yeast mutant strains that were defective in the import motor or the m-AAA protease function. Our results show that the sorting of mitochondrial proteins carrying moderately hydrophobic transmembrane segments is sensitive to cellular conditions, implying that mitochondrial import and membrane sorting in the physiological environment may be dynamically tuned.

Indexed as

Amino Acid SequenceCellular MicroenvironmentGTP-Binding ProteinsHydrophobic and Hydrophilic InteractionsMembrane ProteinsMitochondriaMitochondrial MembranesMitochondrial ProteinsMolecular Sequence DataProtein TransportRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsGTP-Binding ProteinsMembrane ProteinsMGM1 protein, S cerevisiaeMitochondrial ProteinsRecombinant ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID23184936
PMCPMC3548465

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.