Evidence map›Paper›PMID 23184411›Full record

ArticleJournal of the American Society for Mass Spectrometry2013

Mass spectrometric imaging of red fluorescent protein in breast tumor xenografts.

Kamila Chughtai, Lu Jiang, Harm Post, Paul T Winnard, Tiffany R Greenwood, Venu Raman, Zaver M Bhujwalla, Ron M A Heeren, Kristine Glunde

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Choline metabolism-based molecular diagnosis of cancer: an update.Expert review of molecular diagnostics · 2015
    Review
  5. Review
  6. Chemo-informatic strategy for imaging mass spectrometry-based hyperspectral profiling of lipid signatures in colorectal cancer.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Kamila ChughtaiBiomolecular Imaging MS group, FOM Institute AMOLF, Amsterdam, The Netherlands.
Lu Jiang
Harm Post
Paul T Winnard
Tiffany R Greenwood
Venu Raman
Zaver M Bhujwalla
Ron M A Heeren
Kristine Glunde
Johns Hopkins Medicine · USJohns Hopkins University · USNetherlands Metabolomics Centre · NLSidney Kimmel Comprehensive Cancer Center · USInstitute for Atomic and Molecular Physics · NL

Funding

Multi-scale Molecular Imaging of the Degradome in Breast TumorsR01CA154725 · NCI · JOHNS HOPKINS UNIVERSITY · PI GLUNDE, KRISTINE · 2011 to 2015
$1.7M
Imaging hypoxia-driven signaling pathways in the breast tumor microenvironmentR01CA134695 · NCI · JOHNS HOPKINS UNIVERSITY · PI GLUNDE, KRISTINE · 2008 to 2012
$1.5M
NCI NIH HHS R01 CA134695NCI NIH HHS R01 CA154725
6 · The paper itself

Abstract

Mass spectrometric imaging (MSI) in combination with electrospray mass spectrometry (ESI-MS) is a powerful technique for visualization and identification of a variety of different biomolecules directly from thin tissue sections. As commonly used tools for molecular reporting, fluorescent proteins are molecular reporter tools that have enabled the elucidation of a multitude of biological pathways and processes. To combine these two approaches, we have performed targeted MS analysis and MALDI-MSI visualization of a tandem dimer (td)Tomato red fluorescent protein, which was expressed exclusively in the hypoxic regions of a breast tumor xenograft model. For the first time, a fluorescent protein has been visualized by both optical microscopy and MALDI-MSI. Visualization of tdTomato by MALDI-MSI directly from breast tumor tissue sections will allow us to simultaneously detect and subsequently identify novel molecules present in hypoxic regions of the tumor. MS and MALDI-MSI of fluorescent proteins, as exemplified in our study, is useful for studies in which the advantages of MS and MSI will benefit from the combination with molecular approaches that use fluorescent proteins as reporters.

Indexed as

AnimalsBreast NeoplasmsCell Line, TumorFemaleHumansImage Processing, Computer-AssistedLuminescent ProteinsMiceMice, NudeMolecular ImagingMolecular Sequence DataPeptide FragmentsRed Fluorescent ProteinSpectrometry, Mass, Electrospray IonizationTransplantation, HeterologousTrypsinLuminescent ProteinsPeptide FragmentsRed Fluorescent ProteinTrypsin

Identifiers

PMID23184411
PMCPMC4162311
OpenAlexW2021728932

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.