Evidence map›Paper›PMID 23183667›Full record

ArticleGenetics2013

Genomic background and generation time influence deleterious mutation rates in Daphnia.

Leigh C Latta, Kendall K Morgan, Casse S Weaver, Desiree Allen, Sarah Schaack, Michael Lynch

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  5. Article
  6. Fitness effects of spontaneous mutations in a warming world.Evolution; international journal of organic evolution · 2021
    Article
  7. Article
  8. Article
  9. Evolved tolerance to freshwater salinization in zooplankton: life-history trade-offs, cross-tolerance and reducing cascading effects.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Article
  10. Article
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  14. Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Leigh C LattaDepartment of Biology, Reed College, Portland, OR 97202, USA. llatta@reed.edu
Kendall K Morgan
Casse S Weaver
Desiree Allen
Sarah Schaack
Michael Lynch
Reed College · USDuke University · USEureka College · USIndiana University Bloomington · USUniversity of Western Australia · AU

Funding

Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
The Rate and Molecular Spectrum of Spontaneous MutationsR01GM036827 · NIGMS · UNIVERSITY OF OREGON · PI LYNCH, MICHAEL R · 1988 to 2016
$5.7M
NIGMS NIH HHS 5 T32 GM07413NIGMS NIH HHS R01 GM036827NIGMS NIH HHS T32 GM007413
6 · The paper itself

Abstract

Understanding how genetic variation is generated and how selection shapes mutation rates over evolutionary time requires knowledge of the factors influencing mutation and its effects on quantitative traits. We explore the impact of two factors, genomic background and generation time, on deleterious mutation in Daphnia pulicaria, a cyclically parthenogenic aquatic microcrustacean, using parallel mutation-accumulation experiments. The deleterious mutational properties of life-history characters for individuals from two different populations, and for individuals maintained at two different generation times, were quantified and compared. Mutational properties varied between populations, especially for clutch size, suggesting that genomic background influences mutational properties for some characters. Generation time was found to have a greater effect on mutational properties, with higher per-generation deleterious mutation rates in lines with longer generation times. These results suggest that differences in genetic architecture among populations and species may be explained in part by demographic features that significantly influence generation time and therefore the rate of mutation.

Indexed as

GenomeMutation RateAnimalsClutch SizeDaphniaEvolution, MolecularGenetic FitnessPopulationReproductionTime Factors

Identifiers

PMID23183667
PMCPMC3567742
OpenAlexW2152049857

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.