Evidence map›Paper›PMID 23183136›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2013

TOMM40 intron 6 poly-T length, age at onset, and neuropathology of AD in individuals with APOE ε3/ε3.

Ge Li, Lynn M Bekris, Lesley Leong, Ellen J Steinbart, Jane B Shofer, Paul K Crane, Eric B Larson, Elaine R Peskind, Thomas D Bird, Chang-En Yu

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Article
  7. TOMM40-APOE haplotypes are associated with cognitive decline in non-demented Blacks.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2021
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. The effects of the TOMM40 poly-T alleles on Alzheimer's disease phenotypes.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2018
    Review
  14. Neuropathologic features of TOMM40 '523 variant on late-life cognitive decline.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2017
    Article
  15. Article
  16. Neurology · 2017
    Article
  17. Mitochondria, Cybrids, Aging, and Alzheimer's Disease.Progress in molecular biology and translational science · 2017
    Review
  18. New Genetic Approaches to AD: Lessons from APOE-TOMM40 Phylogenetics.Current neurology and neuroscience reports · 2016
    Review
  19. Article
  20. The Broad Impact of TOM40 on Neurodegenerative Diseases in Aging.Journal of Parkinson's disease and Alzheimer's disease · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Ge LiDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA, USA. gli@u.washington.edu
Lynn M Bekris
Lesley Leong
Ellen J Steinbart
Jane B Shofer
Paul K Crane
Eric B Larson
Elaine R Peskind
Thomas D Bird
Chang-En Yu
University of Washington · USGroup Health Cooperative · USVA Puget Sound Health Care System · US

Funding

THERAPEUTIC EFFECTS OF INTRA-NASAL INSULIN DETEMIRP50AG005136 · NIA · UNIVERSITY OF WASHINGTON · PI KAEBERLEIN, MATT · 1985 to 2019
$57.2M
Furthering scientific understanding of mechanisms underlying resilience to the effects of AD pathology by incorporating state of the art quantification of gliosis, inflammation, & synaptic toxicityU01AG006781 · NIA · UNIVERSITY OF WASHINGTON · PI CRANE, PAUL K, LARSON, ERIC B · 1986 to 2020
$39.3M
Effects of Simvastatin on CSF AD biomarkers in cognitively normal subjectsR01AG033693 · NIA · UNIVERSITY OF WASHINGTON · PI LI, GAIL · 2009 to 2011
$1.4M
Biomarker Expression and Regulatory Haplotypes in Alzheimer's DiseaseR00AG034214 · NIA · UNIVERSITY OF WASHINGTON · PI BEKRIS, LYNN · 2012 to 2014
$725k
Biomarker Expression and Regulatory Haplotypes in Alzheimer's DiseaseK99AG034214 · NIA · UNIVERSITY OF WASHINGTON · PI BEKRIS, LYNN · 2010 to 2011
$254k
BLRD VA I01 BX000933NIA NIH HHS AG006781NIA NIH HHS AG033693NIA NIH HHS AG034214NIA NIH HHS AG05136NIA NIH HHS K99 AG034214NIA NIH HHS P50 AG005136NIA NIH HHS R00 AG034214NIA NIH HHS R01 AG033693NIA NIH HHS U01 AG006781
6 · The paper itself

Abstract

backgroundThis study investigates the association between TOMM40 poly-T length, age at onset, and neuropathology in individuals with Alzheimer's disease (AD) with the apolipoprotein E (APOE) ε3/ε3 allele.

methodsThirty-two presenilin 1 (PSEN1) mutation carriers with AD, 27 presenilin 2 (PSEN2) mutation carriers with AD, 59 participants with late-onset AD (LOAD), and 168 autopsied subjects from a community-based cohort were genotyped for TOMM40 intron 6 poly-T (rs10524523) length using short tandem repeat assays.

resultsAmong AD individuals with PSEN2 mutations, the presence of a long poly-T was associated with an earlier age at onset, whereas there were no such associations for subjects with PSEN1 mutations or LOAD. In community-based participants, the presence of a long poly-T was associated with increased neuritic tangles and a greater likelihood of pathologically diagnosed AD.

conclusionTOMM40 intron 6 poly-T length may explain some of the variation in age at onset in PSEN2 familial AD and may be associated with AD neuropathology in persons with APOE ε3/ε3.

Indexed as

AdultAgedAged, 80 and overAge of OnsetAlzheimer DiseaseApolipoprotein E3FemaleGenetic Predisposition to DiseaseGenotypeHumansIntronsMaleMembrane Transport ProteinsMiddle AgedMitochondrial Precursor Protein Import Complex ProteinsMutationApolipoprotein E3Membrane Transport ProteinsMitochondrial Precursor Protein Import Complex ProteinsPoly TPresenilin-1Presenilin-2PSEN1 protein, humanPSEN2 protein, humanTOMM40 protein, humanAge at onsetAlzheimer’s diseaseAPOEGeneticNeuropathologyPSEN1 mutationPSEN2 mutationTOMM40

Identifiers

PMID23183136
PMCPMC3606272
OpenAlexW2154893363

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.