Evidence map›Paper›PMID 23181431›Full record

ArticleJournal of proteome research2013

Novel phosphorylation sites in the S. cerevisiae Cdc13 protein reveal new targets for telomere length regulation.

Yun Wu, Peter A DiMaggio, David H Perlman, Virginia A Zakian, Benjamin A Garcia

Abstract read
In one paragraph

Article in Journal of proteome research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Telomeres and Cancer.Life (Basel, Switzerland) · 2021
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Structure and function of the telomeric CST complex.Computational and structural biotechnology journal · 2016
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. DNA repair at telomeres: keeping the ends intact.Cold Spring Harbor perspectives in biology · 2013
    Review
  13. Article
  14. Article
  15. Cdc13 at a crossroads of telomerase action.Frontiers in oncology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yun WuDepartment of Molecular Biology, Princeton University, Princeton, New Jersey 08544, United States.
Peter A DiMaggio
David H Perlman
Virginia A Zakian
Benjamin A Garcia
Princeton University · US

Funding

STRUCTURE &BEHAVIOR OF YEAST TELOMERESR01GM043265 · NIGMS · PRINCETON UNIVERSITY · PI ZAKIAN, VIRGINIA A. · 1990 to 2015
$7.6M
DNA REPLICATION AND CHROMOSOME STRUCUTRE IN YEASTR01GM026938 · NIGMS · PRINCETON UNIVERSITY · PI ZAKIAN, VIRGINIA A. · 1986 to 2016
$4.3M
Novel Methodology for Quantitative High-throughput Cancer EpigeneticsDP2OD007447 · OD · UNIVERSITY OF PENNSYLVANIA · PI GARCIA, BENJAMIN A · 2010 to 2010
$2.4M
A Proteomic Interrogation of the Histone Code during HCMV InfectionF32GM093490 · NIGMS · PRINCETON UNIVERSITY · PI DIMAGGIO, PETER A. · 2010 to 2011
$85k
NIGMS NIH HHS F32 GM093490NIGMS NIH HHS GM43265NIGMS NIH HHS R01 GM026938NIGMS NIH HHS R01 GM043265NIH HHS DP2 OD007447NIH HHS DP2OD007447
6 · The paper itself

Abstract

The S. cerevisiae Cdc13 is a multifunctional protein with key roles in regulation of telomerase, telomere end protection, and conventional telomere replication, all of which are cell cycle-regulated processes. Given that phosphorylation is a key mechanism for regulating protein function, we identified sites of phosphorylation using nano liquid chromatography-tandem mass spectrometry (nanoLC-MS/MS). We also determined phosphorylation abundance on both wild type (WT) and a telomerase deficient form of Cdc13, encoded by the cdc13-2 allele, in both G1 phase cells, when telomerase is not active, and G2/M phase cells, when it is. We identified 21 sites of in vivo phosphorylation, of which only five had been reported previously. In contrast, phosphorylation of two in vitro targets of the ATM-like Tel1 kinase, S249 and S255, was not detected. This result helps resolve conflicting data on the importance of phosphorylation of these residues in telomerase recruitment. Multiple residues showed differences in their cell cycle pattern of modification. For example, phosphorylation of S314 was significantly higher in the G2/M compared to the G1 phase and in WT versus mutant Cdc13, and a S314D mutation negatively affected telomere length. Our findings provide new targets in a key telomerase regulatory protein for modulation of telomere dynamics.

Indexed as

Saccharomyces cerevisiae ProteinsTelomeraseTelomereTelomere-Binding ProteinsTelomere HomeostasisCell CycleDNA ReplicationMutationPhosphorylationSaccharomyces cerevisiaeTandem Mass SpectrometryCdc13 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseTelomere-Binding Proteins

Identifiers

PMID23181431
PMCPMC3739059
OpenAlexW1965544079

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.