Evidence map›Paper›PMID 23180123›Full record

ArticleFolia microbiologica2013

Effect of the amino acid substitution in the DNA-binding domain of the Fur regulator on production of pyoverdine.

Renáta Valešová, Andrea Palyzová, Helena Marešová, Václav Stěpánek, Peter Babiak, Pavel Kyslík

Abstract read
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In one paragraph

Article in Folia microbiologica, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Renáta ValešováLaboratory of Enzyme Technology, Institute of Microbiology v.v.i, Academy of Sciences of the Czech Republic, Vídeňská 1083, Prague, Czech Republic.
Andrea Palyzová
Helena Marešová
Václav Stěpánek
Peter Babiak
Pavel Kyslík
Czech Academy of Sciences, Institute of Microbiology · CZCzech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ferric uptake regulator gene (fur), its promoter region and Fur box of pvdS gene involved in siderophore-mediated iron uptake system were sequenced in the parent strain Pseudomonas aeruginosa PAO1 and in the fur mutant FPA121 derived from the strain PAO1. We identified the gene fur 179 bearing a novel, single-point mutation that changed the amino acid residue Gln60Pro in the DNA-binding domain of the Fur protein. The synthesis of pyoverdine was studied in cultures of the strains PAO1 and FPA121 grown in iron-deplete and iron-replete (60 μmol/L FeIII) medium. The amino acid replacement in the regulatory Fur protein is responsible for the overproduction of pyoverdine in iron-deplete and iron-replete medium. No mutation was identified in the Fur box of the gene pvdS.

Indexed as

Amino Acid SubstitutionBacterial ProteinsBinding SitesCulture MediaDNA-Binding ProteinsDNA Mutational AnalysisFerric CompoundsMutant ProteinsOligopeptidesPseudomonas aeruginosaRepressor ProteinsBacterial ProteinsCulture MediaDNA-Binding ProteinsFerric Compoundsferric uptake regulating proteins, bacterialMutant ProteinsOligopeptidespyoverdinRepressor Proteins

Identifiers

PMID23180123
OpenAlexW2156772811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.