Evidence map›Paper›PMID 23179856›Full record

ArticleThe Journal of biological chemistry2013

Inositol pyrophosphates modulate S phase progression after pheromone-induced arrest in Saccharomyces cerevisiae.

Hrvoje Banfic, Antonio Bedalov, John D York, Dora Visnjic

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Hrvoje BanficDepartment of Physiology and Croatian Institute for Brain Research, School of Medicine, University of Zagreb, Salata 3, 10 000 Zagreb, Croatia. hrvoje.banfic@zg.t-com.hr
Antonio Bedalov
John D York
Dora Visnjic
University of Zagreb · HRFred Hutch Cancer Center · USVanderbilt University Medical Center · US

Funding

The Role of Inositol Signaling in Human DiseaseR01HL055672 · NHLBI · WASHINGTON UNIVERSITY · PI YORK, JOHN D. · 1996 to 2012
$5.4M
Development of cambinol analogues as antilymphoma agentsR01CA129132 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDALOV, ANTONIO · 2008 to 2012
$1.8M
Protein Biomarkers in Childhood Acute Myeloid LeukemiaR21CA164545 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDALOV, ANTONIO · 2012 to 2013
$441k
NCI NIH HHS R01 CA129132NCI NIH HHS R01-CA129132NCI NIH HHS R21 CA164545NHLBI NIH HHS R01 HL055672NHLBI NIH HHS R01-HL55672-15
6 · The paper itself

Abstract

Several studies have demonstrated the activation of phosphoinositide-specific phospholipase C (Plc) in nuclei of mammalian cells during synchronous progression through the cell cycle, but the downstream targets of Plc-generated inositol 1,4,5-trisphosphate are poorly described. Phospholipid signaling in the budding yeast Saccharomyces cerevisiae shares similarities with endonuclear phospholipid signaling in mammals, and many recent studies point to a role for inositol phosphates, including InsP(5), InsP(6), and inositol pyrophosphates, in mediating the action of Plc. In this study, we investigated the changes in inositol phosphate levels in α-factor-treated S. cerevisiae, which allows cells to progress synchronously through the cell cycle after release from a G(1) block. We found an increase in the activity of Plc1 early after release from the block with a concomitant increase in the levels of InsP(7) and InsP(8). Treatment of cells with the Plc inhibitor U73122 prevented increases in inositol phosphate levels and blocked progression of cells through S phase after pheromone arrest. The enzymatic activity of Kcs1 in vitro and HPLC analysis of [(3)H]inositol-labeled kcs1Δ cells confirmed that Kcs1 is the principal kinase responsible for generation of pyrophosphates in synchronously progressing cells. Analysis of plc1Δ, kcs1Δ, and ddp1Δ yeast mutants further confirmed the role that a Plc1- and Kcs1-mediated increase in pyrophosphates may have in progression through S phase. Our data provide genetic, metabolic, and biochemical evidence that synthesis of inositol pyrophosphates through activation of Plc1 and Kcs1 plays an important role in the signaling response required for cell cycle progression after mating pheromone arrest.

Indexed as

Cell NucleusDiphosphatesEstrenesG1 PhaseGene Expression Regulation, FungalInositol PhosphatesMating FactorPeptidesPhosphodiesterase InhibitorsPhosphotransferases (Phosphate Group Acceptor)PyrrolidinonesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionS PhaseStaining and Labeling1-(6-((3-methoxyestra-1,3,5(10)-trien-17-yl)amino)hexyl)-1H-pyrrole-2,5-dioneDiphosphatesEstrenesInositol PhosphatesKCS1 protein, S cerevisiaeMating FactorPeptidesPhosphodiesterase InhibitorsPhosphotransferases (Phosphate Group Acceptor)Plc1 protein, S cerevisiaePyrrolidinonesSaccharomyces cerevisiae ProteinsTritiumType C Phospholipases

Identifiers

PMID23179856
PMCPMC3548482
OpenAlexW2132835937

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.