Evidence map›Paper›PMID 23179605›Full record

ArticleJournal of applied genetics2013

A note on the organization and expression of β-defensin genes in Polish goats.

E Bagnicka, B Prusak, E Kościuczuk, J Jarczak, J Kaba, N Strzałkowska, A Jóźwik, M Czopowicz, J Krzyżewski, L Zwierzchowski

Open access · hybridAbstract read
In one paragraph

Article in Journal of applied genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

E BagnickaInstitute of Genetics and Animal Breeding, Polish Academy of Sciences, Jastrzębiec, Postępu 1, 05-552, Magdalenka, Poland. e.bagnicka@ighz.pl
B Prusak
E Kościuczuk
J Jarczak
J Kaba
N Strzałkowska
A Jóźwik
M Czopowicz
J Krzyżewski
L Zwierzchowski
Polish Academy of Sciences · PLWarsaw University of Life Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide (cds) and amino acids sequences of the caprine β2-defensin genes were in silico compared to search for the sequence variation and for the LAP gene sequences in the goat genome and for the presence of LAP gene transcripts in goat tissues. The comparison of the exon sequences revealed that the first 64 amino acids are identical in both LAP and β1-defensin. However, the GBD-1 prepropeptide is shorter by 18 amino acids due to the presence of the stop codon UAA at position 209-211 in GBD-1 mRNA. The LAP gene, which was found, so far, only in Indian goat breeds, is absent in the genome of Polish dairy goats. The introns of the caprine β1- and β2-defensin genes were, for the first time, sequenced; their sequences showed 99.6 % identity, differing in six nucleotide positions.

Indexed as

Amino Acid SequenceAnimalsBase Sequencebeta-DefensinsGene ExpressionGenetic VariationGoatsPolandSequence AlignmentSequence Analysis, DNAbeta-Defensinslingual antimicrobial peptide

Identifiers

PMID23179605
PMCPMC3548089
OpenAlexW1993696552

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.