ArticleThe ISME journal2013
Reproducibility of Vibrionaceae population structure in coastal bacterioplankton.
Article in The ISME journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
31 citing papers in PubMed, 60 citations in OpenAlex.
- The ecology and evolution of microbial immune systems: a look on the wild vibrio side.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025Review
- Vertical dynamics of free-living and particle-associatedFrontiers in microbiology · 2023Article
- Fine-Scale Structuring of PlanktonicApplied and environmental microbiology · 2022Article
- Resolving the structure of phage-bacteria interactions in the context of natural diversity.Nature communications · 2022Article
- High-Frequency Variability of Bacterioplankton in Response to Environmental Drivers in Red Sea Coastal Waters.Frontiers in microbiology · 2022Article
- How can microbial population genomics inform community ecology?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020Review
- A New High Throughput Sequencing Assay for Characterizing the Diversity of NaturalFrontiers in microbiology · 2019Article
- Ancestral gene acquisition as the key to virulence potential in environmental Vibrio populations.The ISME journal · 2018Article
- Evolution of a Vegetarian Vibrio: Metabolic Specialization of Vibrio breoganii to Macroalgal Substrates.Journal of bacteriology · 2018Article
- Viruses of the Nahant Collection, characterization of 251 marine Vibrionaceae viruses.Scientific data · 2018Article
- Vibrio Ecology in the Neuse River Estuary, North Carolina, Characterized by Next-Generation Amplicon Sequencing of the Gene Encoding Heat Shock Protein 60 (Applied and environmental microbiology · 2018Article
- High resolution time series reveals cohesive but short-lived communities in coastal plankton.Nature communications · 2018Article
- Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains.MicrobiologyOpen · 2017Article
- Vibrio crassostreae, a benign oyster colonizer turned into a pathogen after plasmid acquisition.The ISME journal · 2017Article
- Environmental Pseudomonads Inhibit Cystic Fibrosis Patient-Derived Pseudomonas aeruginosa.Applied and environmental microbiology · 2017Article
- Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes.Nature communications · 2016Article
- A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population.Applied and environmental microbiology · 2016Article
- Predicting taxonomic and functional structure of microbial communities in acid mine drainage.The ISME journal · 2016Article
- Migration and horizontal gene transfer divide microbial genomes into multiple niches.Nature communications · 2015Article
- Microbial Speciation.Cold Spring Harbor perspectives in biology · 2015Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors at 3 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
How reproducibly microbial populations assemble in the wild remains poorly understood. Here, we assess evidence for ecological specialization and predictability of fine-scale population structure and habitat association in coastal ocean Vibrionaceae across years. We compare Vibrionaceae lifestyles in the bacterioplankton (combinations of free-living, particle, or zooplankton associations) measured using the same sampling scheme in 2006 and 2009 to assess whether the same groups show the same environmental association year after year. This reveals complex dynamics with populations falling primarily into two categories: (i) nearly equally represented in each of the two samplings and (ii) highly skewed, often to an extent that they appear exclusive to one or the other sampling times. Importantly, populations recovered at the same abundance in both samplings occupied highly similar habitats suggesting predictable and robust environmental association while skewed abundances of some populations may be triggered by shifts in ecological conditions. The latter is supported by difference in the composition of large eukaryotic plankton between years, with samples in 2006 being dominated by copepods, and those in 2009 by diatoms. Overall, the comparison supports highly predictable population-habitat linkage but highlights the fact that complex, and often unmeasured, environmental dynamics in habitat occurrence may have strong effects on population dynamics.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.