Evidence map›Paper›PMID 23178594›Full record

ArticleThe EMBO journal2013

The SOSS1 single-stranded DNA binding complex promotes DNA end resection in concert with Exo1.

Soo-Hyun Yang, Ruobo Zhou, Judith Campbell, Junjie Chen, Taekjip Ha, Tanya T Paull

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 85 citations in OpenAlex.

  1. Development of a new recombineering system forSynthetic and systems biotechnology · 2027
    Article
  2. ATM priming and end resection-coupled phosphorylation of MRE11 is important for fork protection and replication restart.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. 53BP1: a DSB escort.Genes & development · 2020
    Review
  13. Homologous Recombination under the Single-Molecule Fluorescence Microscope.International journal of molecular sciences · 2019
    Review
  14. Review
  15. Article
  16. Article
  17. Assembling the Human Resectosome on DNA Curtains.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Soo-Hyun YangThe Department of Molecular Genetics and Microbiology, The Howard Hughes Medical Institute, and Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX, USA.
Ruobo Zhou
Judith Campbell
Junjie Chen
Taekjip Ha
Tanya T Paull
Howard Hughes Medical Institute · USCalifornia Institute of Technology · USThe University of Texas at Austin · USThe University of Texas MD Anderson Cancer Center · USUniversity of Illinois Urbana-Champaign · US

Funding

Single Molecule Study of Helicase MechanismsR01GM065367 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HA, TAEKJIP · 2002 to 2014
$3.6M
Mrell/Rad50/Nbs1 and DNA double strand break repairR01CA094008 · NCI · UNIVERSITY OF TEXAS AUSTIN · PI PAULL, TANYA T · 2002 to 2011
$2.8M
Redox Signaling and Stem Cell FunctionR01GM100196 · NIGMS · UNIVERSITY OF ROCHESTER · PI BOHMANN, DIRK, JASPER, HEINRICH · 2012 to 2015
$1.7M
Combined ultrahigh-resolution optical tweezers and single-molecule fluorescenceR21RR025341 · NCRR · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHEMLA, YANN R. · 2009 to 2010
$535k
NCI NIH HHS CA094008NCI NIH HHS R01 CA094008NCRR NIH HHS R21 RR025341NCRR NIH HHS RR025341NIGMS NIH HHS GM065367NIGMS NIH HHS GM100196NIGMS NIH HHS R01 GM065367NIGMS NIH HHS R01 GM100196
6 · The paper itself

Abstract

The human SSB homologue 1 (hSSB1) has been shown to facilitate homologous recombination and double-strand break signalling in human cells. Here, we compare the DNA-binding properties of the SOSS1 complex, containing SSB1, with Replication Protein A (RPA), the primary single-strand DNA (ssDNA) binding complex in eukaryotes. Ensemble and single-molecule approaches show that SOSS1 binds ssDNA with lower affinity compared to RPA, and exhibits less stable interactions with DNA substrates. Nevertheless, the SOSS1 complex is uniquely capable of promoting interaction of human Exo1 with double-strand DNA ends and stimulates its activity independently of the MRN complex in vitro. Both MRN and SOSS1 also act to mitigate the inhibitory action of the Ku70/80 heterodimer on Exo1 activity in vitro. These results may explain why SOSS complexes do not localize with RPA to replication sites in human cells, yet have a strong effect on double-strand break resection and homologous recombination.

Indexed as

Antigens, NuclearDNADNA-Binding ProteinsDNA Breaks, Double-StrandedDNA RepairDNA Repair EnzymesDNA ReplicationDNA, Single-StrandedEukaryotic CellsExodeoxyribonucleasesFluorescence Resonance Energy TransferHomologous RecombinationHumansKu AutoantigenMitochondrial ProteinsMultiprotein ComplexesAntigens, NuclearDNADNA-Binding ProteinsDNA Repair EnzymesDNA, Single-StrandedEXO1 protein, humanExodeoxyribonucleasesKu AutoantigenMitochondrial ProteinsMultiprotein ComplexesNABP2 protein, humanReplication Protein ARPA1 protein, humanXrcc6 protein, human

Identifiers

PMID23178594
PMCPMC3545304
OpenAlexW2061932738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.