Evidence map›Paper›PMID 23178454›Full record

ArticleNature structural & molecular biology2013

Site-specific monoubiquitination activates Ras by impeding GTPase-activating protein function.

Rachael Baker, Steven M Lewis, Atsuo T Sasaki, Emily M Wilkerson, Jason W Locasale, Lewis C Cantley, Brian Kuhlman, Henrik G Dohlman, Sharon L Campbell

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 102 citations in OpenAlex.

  1. Review
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  15. Article
  16. Post-translational modification of RAS proteins.Current opinion in structural biology · 2021
    Review
  17. Review
  18. Article
  19. Review
  20. The Ubiquitinated Axon: Local Control of Axon Development and Function by Ubiquitin.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Rachael BakerDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Steven M Lewis
Atsuo T Sasaki
Emily M Wilkerson
Jason W Locasale
Lewis C Cantley
Brian Kuhlman
Henrik G Dohlman
Sharon L Campbell
University of North Carolina at Chapel Hill · USBeth Israel Deaconess Medical Center · USCenter for Systems Biology · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
The RAS and P13K Pathways in Pancreatic AdenocarcinomaP01CA117969 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DEPINHO, RONALD ANTHONY · 2006 to 2025
$41.7M
ROSETTA An Integrated Protein Structure Modeling SuiteR01GM073151 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KUHLMAN, BRIAN A · 2005 to 2019
$7.8M
MOLECULAR AND CELLULAR BIOPHYSICS TRAINING PROGRAMT32GM008570 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KUHLMAN, BRIAN A, SLEP, KEVIN C · 1995 to 2022
$5.1M
PROTEIN KINASE SIGNALING PATHWAYSR01GM056203 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CANTLEY, LEWIS C. · 1997 to 2012
$4.5M
The Role of PI3K in Growth RegulationR01GM041890 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI CANTLEY, LEWIS C. · 1990 to 2016
$4.1M
Designing Affinity and Specificity at Protein InterfacesR01GM073960 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KUHLMAN, BRIAN A · 2005 to 2018
$3.1M
Modeling Feedback Regulation of Cell SignalingR01GM073180 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DOHLMAN, HENRIK G. · 2005 to 2012
$2.6M
Structure and Regulation of DBl ProteinsR01CA089614 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CAMPBELL, SHARON L · 2001 to 2012
$2.5M
Regulation of Ras by MonoubiquitinationR01GM106227 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CAMPBELL, SHARON L · 2013 to 2016
$1.5M
NCI NIH HHS P01 CA117969NCI NIH HHS P01CA117969NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA089614NCI NIH HHS R01CA089614NIGMS NIH HHS R01 GM041890NIGMS NIH HHS R01 GM056203NIGMS NIH HHS R01 GM073151NIGMS NIH HHS R01GM073151NIGMS NIH HHS R01 GM073180NIGMS NIH HHS R01GM073180-06S1NIGMS NIH HHS R01 GM073960NIGMS NIH HHS R01GM073960NIGMS NIH HHS R01 GM106227NIGMS NIH HHS R01GM41890NIGMS NIH HHS T32 GM008570NIGMS NIH HHS T32GM008570
6 · The paper itself

Abstract

Cell growth and differentiation are controlled by growth factor receptors coupled to the GTPase Ras. Oncogenic mutations disrupt GTPase activity, leading to persistent Ras signaling and cancer progression. Recent evidence indicates that monoubiquitination of Ras leads to Ras activation. Mutation of the primary site of monoubiquitination impairs the ability of activated K-Ras (one of the three mammalian isoforms of Ras) to promote tumor growth. To determine the mechanism of human Ras activation, we chemically ubiquitinated the protein and analyzed its function by NMR, computational modeling and biochemical activity measurements. We established that monoubiquitination has little effect on the binding of Ras to guanine nucleotide, GTP hydrolysis or exchange-factor activation but severely abrogates the response to GTPase-activating proteins in a site-specific manner. These findings reveal a new mechanism by which Ras can trigger persistent signaling in the absence of receptor activation or an oncogenic mutation.

Indexed as

Cell DifferentiationCell LineCell ProliferationGuanineHEK293 CellsHumansras GTPase-Activating Proteinsras ProteinsSignal TransductionUbiquitinationGuanineras GTPase-Activating Proteinsras Proteins

Identifiers

PMID23178454
PMCPMC3537887
OpenAlexW2172034799

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.