Evidence map›Paper›PMID 23178376›Full record

ArticleExperimental hematology2013

Epigenetic regulation of the Ink4a-Arf (Cdkn2a) tumor suppressor locus in the initiation and progression of Notch1-driven T cell acute lymphoblastic leukemia.

Emmanuel J Volanakis, Mark R Boothby, Charles J Sherr

Open access · greenAbstract read
In one paragraph

Article in Experimental hematology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Emmanuel J VolanakisDivision of Pediatric Hematology-Oncology, Vanderbilt University, Nashville, TN, USA. emmanuel.volanakis@vanderbilt.edu
Mark R Boothby
Charles J Sherr
Vanderbilt University · USSt. Jude Children's Research Hospital · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
LABORATORY TRAINING FOR CLINICAL ONCOLOGISTST32CA070089 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DOWNING, JAMES R · 1996 to 2011
$3.7M
Roles of rictor in mTOR signaling, differentiation & immune memory via Akt & PKCR01HL106812 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BOOTHBY, MARK R · 2011 to 2018
$3.1M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA068485NCI NIH HHS T32 CA070089NHLBI NIH HHS R01 HL106812
6 · The paper itself

Abstract

Activating mutations of NOTCH1 and deletion of the INK4A-ARF (CDKN2A) tumor suppressor locus are two of the most frequent genetic alterations in T cell acute lymphoblastic leukemia (T-ALL). In a murine model of T-ALL induced by the intracellular domain of Notch1 (ICN1), the genetic interaction between ICN1 signaling and Arf inactivation is developmentally stage-specific, with a more pronounced requirement for Arf deletion in thymocytes than in bone marrow precursors targeted for transformation. In the thymus, the target cell for transformation is a CD4 and CD8 double-negative progenitor that undergoes T cell receptor beta-chain rearrangement, a cell type in which polycomb silencing of Ink4a-Arf is normally requisite. Epigenetic remodeling during tumor progression licenses Arf as a tumor suppressor and in turn provides the selective pressure for Ink4a-Arf deletion in clonal T-ALLs that emerge.

Indexed as

AnimalsBinding SitesBone Marrow CellsCell LineCells, CulturedCell Transformation, NeoplasticCoculture TechniquesCyclin-Dependent Kinase Inhibitor p16Disease ProgressionDogsEpigenesis, GeneticFlow CytometryGene ExpressionMiceMice, Inbred C57BLMice, KnockoutCyclin-Dependent Kinase Inhibitor p16Receptor, Notch1Tumor Suppressor Protein p14ARF

Identifiers

PMID23178376
PMCPMC3860824
OpenAlexW2094448610

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.