Evidence map›Paper›PMID 23177200›Full record

ArticleChemistry & biology2012

A designed inhibitor of a CLC antiporter blocks function through a unique binding mode.

Andrew E Howery, Shelley Elvington, Sherwin J Abraham, Kee-Hyun Choi, Sierra Dworschak-Simpson, Sabrina Phillips, Christopher M Ryan, R Lea Sanford, Jonas Almqvist, Kevin Tran and 7 more

Abstract read
In one paragraph

Article in Chemistry & biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Biophysical and Pharmacological Insights to CLC Chloride Channels.Handbook of experimental pharmacology · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Multiscale Kinetic Modeling Reveals an Ensemble of ClJournal of the American Chemical Society · 2018
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Novel diuretic targets.American journal of physiology. Renal physiology · 2013
    Review
  18. Review
  19. Surprises from an unusual CLC homolog.Biophysical journal · 2012
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Andrew E HoweryDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford University, Stanford, CA 94305, USA.
Shelley Elvington
Sherwin J Abraham
Kee-Hyun Choi
Sierra Dworschak-Simpson
Sabrina Phillips
Christopher M Ryan
R Lea Sanford
Jonas Almqvist
Kevin Tran
Thomas A Chew
Ulrich Zachariae
Olaf S Andersen
Julian Whitelegge
Kimberly Matulef
Justin Du Bois
Merritt C Maduke
Stanford University · USCornell University · USUniversity of California, Los Angeles · USUniversity of San Diego · USUniversity of Edinburgh · GB

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI GONZALEZ, ANA M · 1985 to 2011
$38.9M
Energetics of Channel-Bilayer InteractionsR01GM021342 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ANDERSEN, OLAF S. · 1985 to 2021
$9.9M
Mechanisms of CIC Chloride Transport ProteinsR01GM070773 · NIGMS · STANFORD UNIVERSITY · PI MADUKE, MERRITT C · 2005 to 2009
$1.5M
High Resolution Hybrid FT-ICR Mass SpectrometerS10RR023045 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2006 to 2006
$1.2M
NCRR NIH HHS P41 RR001209NCRR NIH HHS S10 RR023045NIGMS NIH HHS GM021342NIGMS NIH HHS GM021342-35S1NIGMS NIH HHS GM070773NIGMS NIH HHS GM070773-05S1NIGMS NIH HHS R01 GM021342NIGMS NIH HHS R01 GM070773
6 · The paper itself

Abstract

The lack of small-molecule inhibitors for anion-selective transporters and channels has impeded our understanding of the complex mechanisms that underlie ion passage. The ubiquitous CLC "Chloride Channel" family represents a unique target for biophysical and biochemical studies because its distinctive protein fold supports both passive chloride channels and secondary-active chloride-proton transporters. Here, we describe the synthesis and characterization of a specific small-molecule inhibitor directed against a CLC antiporter (ClC-ec1). This compound, 4,4'-octanamidostilbene-2,2'-disulfonate (OADS), inhibits ClC-ec1 with low micromolar affinity and has no specific effect on a CLC channel (ClC-1). Inhibition of ClC-ec1 occurs by binding to two distinct intracellular sites. The location of these sites and the lipid dependence of inhibition suggest potential mechanisms of action. This compound will empower research to elucidate differences between antiporter and channel mechanisms and to develop treatments for CLC-mediated disorders.

Indexed as

AntiportersBinding SitesChloride ChannelsEscherichia coli ProteinsLipid BilayersMolecular Dynamics SimulationMutationStilbenesSulfonic Acids4,4'-octanamidostilbene-2,2'-disulfonic acidAntiportersChloride ChannelsCLC-1 channelCLC-ec1 protein, E coliEscherichia coli ProteinsLipid BilayersStilbenesSulfonic Acids

Identifiers

PMID23177200
PMCPMC3508466
OpenAlexW1985919732

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.