Evidence map›Paper›PMID 23176121›Full record

ArticleThe FEBS journal2013

Role of transcription factor Sp1 and RNA binding protein HuR in the downregulation of Dr+ Escherichia coli receptor protein decay accelerating factor (DAF or CD55) by nitric oxide.

Manu Banadakoppa, Daniel Liebenthal, David E Nowak, Petri Urvil, Uma Yallampalli, Gerald M Wilson, Aparna Kishor, Chandra Yallampalli

Abstract read
In one paragraph

Article in The FEBS journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Apyrase Elicits Host Antimicrobial Responses and Resolves Infection in Burns.Journal of burn care & research : official publication of the American Burn Association
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Manu BanadakoppaDepartment of Obstetrics and Gynecology, University of Texas Medical Branch, Galveston, TX 77555, USA.
Daniel Liebenthal
David E Nowak
Petri Urvil
Uma Yallampalli
Gerald M Wilson
Aparna Kishor
Chandra Yallampalli
The University of Texas Medical Branch at Galveston · USUniversity of Maryland, Baltimore · US

Funding

SEX STEROID HORMONES AND CALCITONIN GENE RELATED PEPTIDER01HL058144 · NHLBI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI CHAUHAN, MADHU LATA S., YALLAMPALLI, CHANDRASEKHAR · 1998 to 2022
$6.9M
Mechanisms directing oncoprotein and cytokine mRNA decayR01CA102428 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI WILSON, GERALD M. · 2003 to 2013
$2.8M
Low birth weight, uterine infection, and nitric oxideR01HL072650 · NHLBI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI YALLAMPALLI, CHANDRASEKHAR · 2003 to 2007
$1.7M
Nitric oxide regulation of CD55 and infectionR01HD057013 · NICHD · UNIVERSITY OF TEXAS MED BR GALVESTON · PI YALLAMPALLI, CHANDRASEKHAR · 2009 to 2013
$1.5M
Developmental programming: influence of sex steroids and mechanismsR01HL102866 · NHLBI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI YALLAMPALLI, CHANDRASEKHAR · 2011 to 2014
$1.5M
Effects of Cancer Symptoms on Minority CaregiversK07CA102482 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI PALOS, GUADALUPE R · 2005 to 2009
$514k
NCI NIH HHS K07 CA102482NCI NIH HHS R01 CA102428NCI NIH HHS R01CA102482NHLBI NIH HHS R01 HL058144NHLBI NIH HHS R01 HL072650NHLBI NIH HHS R01 HL102866NHLBI NIH HHS R01HL102866NHLBI NIH HHS R01HL58144NICHD NIH HHS R01 HD057013NICHD NIH HHS R01HD057013
6 · The paper itself

Abstract

We previously reported that nitric oxide (NO) reduces the rate of bacteremia and maternal mortality in pregnant rats with uterine infection by Escherichia coli expressing the Dr Fimbria (Dr(+) ). The epithelial invasion of Dr(+) E. coli is dependent on the expression level of its cellular receptor decay accelerating factor (DAF). NO reduces the rate of bacteremia by downregulating the expression of DAF. In this study, we elucidated the role of transcription factor Sp1 and RNA binding protein HuR in the downregulation of human DAF by NO. We generated a series of deletion mutant constructs of DAF gene 5'-untranslated region and mapped the NO-response region upstream to the core promoter region of the DAF gene. One of the several Sp1 binding sites in the DAF 5'-untranslated region was located within the NO-response region. The binding of Sp1 to this site was inhibited by NO. Furthermore, NO also promoted the degradation of DAF mRNA. The 3'-untranslated region of DAF harbors an AU-rich element and this element destabilized the mRNA transcript. NO promoted the rapid degradation of DAF mRNA by inhibiting the binding of mRNA stabilizing protein HuR to this AU-rich region. The inhibition of binding of HuR to the AU-rich region was due to the S-nitrosylation of one or more cysteine residues by NO. Thus, these data reveal the molecular mediators of transcriptional and post-transcriptional regulation of DAF by NO with implications in pathophysiology related to DAF.

Indexed as

3' Untranslated RegionsBinding SitesBlotting, WesternCD55 AntigensCell Line, TumorCysteineDown-RegulationELAV ProteinsEscherichia coliFimbriae ProteinsHumansImmunoprecipitationMutationNitric OxideNitric Oxide DonorsNitroso Compounds2,2'-(hydroxynitrosohydrazono)bis-ethanamine3' Untranslated RegionsCD55 AntigensCysteineELAV ProteinsFimbriae ProteinsfimbrillinNitric OxideNitric Oxide DonorsNitroso CompoundsRNA, MessengerSp1 Transcription Factor

Identifiers

PMID23176121
PMCPMC3558599
OpenAlexW2039152226

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.