Evidence map›Paper›PMID 23175389›Full record

ReviewBiopolymers2013

STUbLs in chromatin and genome stability.

Renee Garza, Lorraine Pillus

Abstract readReview
In one paragraph

Review in Biopolymers, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Solo or in Concert: SUMOylation in Pathogenic Fungi.The plant pathology journal · 2025
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Renee GarzaSection of Molecular Biology, Division of Biological Sciences, University of California, San Diego, La Jolla, CA.
Lorraine Pillus
University of California, San Diego · US

Funding

FUNCTIONAL ANALYSIS OF THE SIR2 SILENCING PROTEINR01GM054778 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI PILLUS, LORRAINE · 1997 to 2005
$1.5M
Chromatin Regulation by Deacetylation and SUMO-Targeted Ubiquitin LigationR01GM090177 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PILLUS, LORRAINE · 2009 to 2012
$1.3M
Identification of STUbL substrates critical for cell growth and regulationF32GM089101 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GARZA, RENEE M · 2009 to 2011
$151k
NIGMS NIH HHS F32 GM089101NIGMS NIH HHS F32-GM089101NIGMS NIH HHS GM090177NIGMS NIH HHS GM54778NIGMS NIH HHS R01 GM054778NIGMS NIH HHS R01 GM090177
6 · The paper itself

Abstract

Chromatin structure and function is based on the dynamic interactions between nucleosomes and chromatin-associated proteins. In addition to the other post-translational modifications considered in this review issue of Biopolymers, ubiquitin and SUMO proteins also have prominent roles in chromatin function. A specialized form of modification that involves both, referred to as SUMO-targeted ubiquitin ligation, or STUbL [Perry, Tainer, and Boddy, Trends Biochem Sci, 2008, 33, 201-208], has significant effects on nuclear functions, ranging from gene regulation to genomic stability. Intersections between SUMO and ubiquitin in protein modification have been the subject of a recent comprehensive review [Praefcke, Hofmann, and Dohmen, Trends Biochem Sci, 2012, 37, 23-31]. Our goal here is to focus on features of enzymes with STUbL activity that have been best studied, particularly in relation to their nuclear functions in humans, flies, and yeasts. Because there are clear associations of disease and development upon loss of STUbL activities in metazoans, learning more about their function, regulation, and substrates will remain an important goal for the future.

Indexed as

Genomic InstabilityChromatinDiseaseHumansSaccharomyces cerevisiae ProteinsSmall Ubiquitin-Related Modifier ProteinsChromatinSaccharomyces cerevisiae ProteinsSmall Ubiquitin-Related Modifier Proteins

Identifiers

PMID23175389
PMCPMC3507437
OpenAlexW2037278844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.