Evidence map›Paper›PMID 23170227›Full record

ArticleMicrobiologyOpen2012

Prevalence of diarrheagenic Escherichia coli virulence genes in the feces of slaughtered cattle, chickens, and pigs in Burkina Faso.

Assèta Kagambèga, Outi Martikainen, Anja Siitonen, Alfred S Traoré, Nicolas Barro, Kaisa Haukka

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 56 citations in OpenAlex.

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  8. Comparative prevalence of diarrheagenicThe Pan African medical journal · 2024
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  13. Prevalence, Phylogroups and Antimicrobial Susceptibility ofAntibiotics (Basel, Switzerland) · 2021
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  16. Article
  17. Molecular Characterization of DiarrheagenicEuropean journal of microbiology & immunology · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Assèta KagambègaBacteriology Unit, Department of Infectious Disease Surveillance and Control, National Institute for Health and Welfare (THL) P.O. Box 30, FI-00271, Helsinki, Finland ; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance bactéries et virus transmis par les aliments; CRSBAN, Département de Biochimie-Microbiologie, UFR-SVT/Université de Ouagadougou 03 B.P. 7021, Ouagadougou 03, Burkina Faso.
Outi Martikainen
Anja Siitonen
Alfred S Traoré
Nicolas Barro
Kaisa Haukka
Finnish Institute for Health and Welfare · FIUniversité Joseph Ki-Zerbo · BF

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated the prevalence of the virulence genes specific for five major pathogroups of diarrheagenic Escherichia coli (DEC) in primary cultures from feces of animals slaughtered for human consumption in Burkina Faso. For the study, 704 feces samples were collected from cattle (n = 304), chickens (n = 350), and pigs (n = 50) during carcass processing. The presence of the virulence-associated genes in the mixed bacterial cultures was assessed using 16-plex polymerase chain reaction (PCR). Virulence genes indicating presence of DEC were detected in 48% of the cattle, 48% of the chicken, and 68% of the pig feces samples. Virulence genes specific for different DECs were detected in the following percentages of the cattle, chicken, and pig feces samples: Shiga toxin-producing E. coli (STEC) in 37%, 6%, and 30%; enteropathogenic E. coli (EPEC) in 8%, 37%, and 32%; enterotoxigenic E. coli (ETEC) in 4%, 5%, and 18%; and enteroaggregative E. coli (EAEC) in 7%, 6%, and 32%. Enteroinvasive E. coli (EIEC) virulence genes were detected in 1% of chicken feces samples only. The study was the first of its kind in Burkina Faso and revealed the common occurrence of the diarrheal virulence genes in feces of food animals. This indicates that food animals are reservoirs of DEC that may contaminate meat because of the defective slaughter and storage conditions and pose a health risk to the consumers in Burkina Faso.

Indexed as

Cattlechickensdiarrheagenic Escherichia colimultiplex PCRpigsvirulence genes

Identifiers

PMID23170227
PMCPMC3496972
OpenAlexW2094169667

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.