Evidence map›Paper›PMID 23169651›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

DNA damage checkpoint triggers autophagy to regulate the initiation of anaphase.

Farokh Dotiwala, Vinay V Eapen, Jacob C Harrison, Ayelet Arbel-Eden, Vikram Ranade, Satoshi Yoshida, James E Haber

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. DNA damage checkpoint execution and the rules of its disengagement.Frontiers in cell and developmental biology · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Checkpoint Responses to DNA Double-Strand Breaks.Annual review of biochemistry · 2020
    Review
  12. Mec1Cell reports · 2019
    Article
  13. Article
  14. PP2C phosphatases promote autophagy by dephosphorylation of the Atg1 complex.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  15. Review
  16. Camptothecin induces GOncotarget · 2018
    Article
  17. Article
  18. Article
  19. A pathway of targeted autophagy is induced by DNA damage in budding yeast.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Farokh DotiwalaRosenstiel Center and Department of Biology, Brandeis University, Waltham, MA 02445, USA.
Vinay V Eapen
Jacob C Harrison
Ayelet Arbel-Eden
Vikram Ranade
Satoshi Yoshida
James E Haber
Brandeis University · US

Funding

Arrest, Recovery, and Adaptation from DNA DamageR01GM061766 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 2001 to 2016
$4.6M
NIGMS NIH HHS GM61766NIGMS NIH HHS R01 GM061766
6 · The paper itself

Abstract

Budding yeast cells suffering a single unrepaired double-strand break (DSB) trigger the Mec1 (ATR)-dependent DNA damage response that causes them to arrest before anaphase for 12-15 h. Here we find that hyperactivation of the cytoplasm-to-vacuole (CVT) autophagy pathway causes the permanent G2/M arrest of cells with a single DSB that is reflected in the nuclear exclusion of both Esp1 and Pds1. Transient relocalization of Pds1 is also seen in wild-type cells lacking vacuolar protease activity after induction of a DSB. Arrest persists even as the DNA damage-dependent phosphorylation of Rad53 diminishes. Permanent arrest can be overcome by blocking autophagy, by deleting the vacuolar protease Prb1, or by driving Esp1 into the nucleus with a SV40 nuclear localization signal. Autophagy in response to DNA damage can be induced in three different ways: by deleting the Golgi-associated retrograde protein complex (GARP), by adding rapamycin, or by overexpression of a dominant ATG13-8SA mutation.

Indexed as

DNA Breaks, Double-StrandedActive Transport, Cell NucleusAdaptor Proteins, Signal TransducingAnaphaseAutophagyAutophagy-Related ProteinsBlotting, WesternCell Cycle CheckpointsCell Cycle ProteinsEndopeptidasesGreen Fluorescent ProteinsIntracellular Signaling Peptides and ProteinsNuclear ProteinsProtein Serine-Threonine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdaptor Proteins, Signal TransducingATG13 protein, S cerevisiaeAutophagy-Related ProteinsCell Cycle ProteinsEndopeptidasesESP1 protein, S cerevisiaeGreen Fluorescent ProteinsIntracellular Signaling Peptides and ProteinsMEC1 protein, S cerevisiaeNuclear ProteinsPDS1 protein, S cerevisiaeProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSecurinSeparaseSirolimus

Identifiers

PMID23169651
PMCPMC3538254
OpenAlexW2036646583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.