Evidence map›Paper›PMID 23169578›Full record

ArticleHuman mutation2013

The UBIAD1 prenyltransferase links menaquinone-4 [corrected] synthesis to cholesterol metabolic enzymes.

Michael L Nickerson, Allen D Bosley, Jayne S Weiss, Brittany N Kostiha, Yoshihisa Hirota, Wolfgang Brandt, Dominic Esposito, Shigeru Kinoshita, Ludger Wessjohann, Scott G Morham and 4 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Human mutation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 70 citations in OpenAlex.

  1. Allosteric regulation of UBIAD1 trafficking from ER to Golgi revealed by chemical genetic screening.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Review
  3. Review
  4. Review
  5. Post-Translational Regulation of HMG CoA Reductase.Cold Spring Harbor perspectives in biology · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Functional study of SCCD pathogenic geneMolecular medicine reports · 2021
    Article
  10. Article
  11. Corneal dystrophies.Nature reviews. Disease primers · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. UBIAD1 Plays an Essential Role in the Survival of Pancreatic Acinar Cells.International journal of molecular sciences · 2019
    Article
  16. Article
  17. Article
  18. Clinical diversity in patients with Schnyder corneal dystrophy-a novel and known UBIAD1 pathogenic variants.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

14 authors at 9 institutions in 3 countries.

Michael L NickersonCancer and Inflammation Program, National Cancer Institute, National Institutes of Health, Frederick, Maryland 21702, USA. nickersonml@mail.nih.gov
Allen D Bosley
Jayne S Weiss
Brittany N Kostiha
Yoshihisa Hirota
Wolfgang Brandt
Dominic Esposito
Shigeru Kinoshita
Ludger Wessjohann
Scott G Morham
Thorkell Andresson
Howard S Kruth
Toshio Okano
Michael Dean
National Institutes of Health · USKobe Pharmaceutical University · JPLeibniz Institute of Plant Biochemistry · DEKyoto Prefectural University of Medicine · JPLouisiana State University · USNational Cancer Institute · USNational Heart Lung and Blood Institute · USScience Applications International Corporation (United States) · USTransGenada (United States) · US

Funding

Mechanism Of Cholesterol Accumulation In Human AtherosclerosisZIAHL002832 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI KRUTH, HOWARD S · 2009 to 2019
$12.3M
CANCER AND INFLAMMATION GENETICSZIABC011300 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DEAN, MICHAEL · 2010 to 2015
$5.8M
CANCER AND INFLAMMATION: FUNCTION AND THERAPYZIABC011301 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DEAN, MICHAEL · 2010 to 2015
$4.1M
CCR NIH HHS HHSN261200800001CIntramural NIH HHS Z99 CA999999NCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

Schnyder corneal dystrophy (SCD) is an autosomal dominant disease characterized by germline variants in UBIAD1 introducing missense alterations leading to deposition of cholesterol in the cornea, progressive opacification, and loss of visual acuity. UBIAD1 was recently shown to synthesize menaquinone-4 (MK-4, vitamin K(2) ), but causal mechanisms of SCD are unknown. We report a novel c.864G>A UBIAD1 mutation altering glycine 177 to glutamic acid (p.G177E) in six SCD families, including four families from Finland who share a likely founder mutation. We observed reduced MK-4 synthesis by UBIAD1 altered by SCD mutations p.N102S, p.G177R/E, and p.D112N, and molecular models showed p.G177-mutant UBIAD1 disrupted transmembrane helices and active site residues. We show UBIAD1 interacts with HMGCR and SOAT1, enzymes catalyzing cholesterol synthesis and storage, respectively, using yeast two-hybrid screening and immunoprecipitation. Docking simulations indicate cholesterol binds to UBIAD1 in the substrate-binding cleft and substrate-binding overlaps with GGPP binding, an MK-4 substrate, suggesting potential competition between these metabolites. Impaired MK-4 synthesis is a biochemical defect identified in SCD suggesting UBIAD1 links vitamin K and cholesterol metabolism through physical contact between enzymes and metabolites. Our data suggest a role for endogenous MK-4 in maintaining cornea health and visual acuity.

Indexed as

AgedAged, 80 and overAmino Acid SequenceCholesterolCorneaCorneal Dystrophies, HereditaryDimethylallyltranstransferaseFemaleFinlandGenetic VariationGlutamic AcidGlycineHumansHydroxymethylglutaryl CoA ReductasesImmunoprecipitationJapanCholesterolDimethylallyltranstransferaseGlutamic AcidGlycineHMGCR protein, humanHydroxymethylglutaryl CoA ReductasesmenatetrenoneSterol O-Acyltransferasesterol O-acyltransferase 1UBIAD1 protein, humanVitamin K 2

Identifiers

PMID23169578
PMCPMC6444929
OpenAlexW2128179467

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.