Evidence map›Paper›PMID 23169290›Full record

ArticleBritish journal of cancer2012

Analysis of gene alterations of mitochondrial DNA D-loop regions to determine breast cancer clonality.

S Masuda, T Kadowaki, N Kumaki, X Tang, Y Tokuda, S Yoshimura, S Takekoshi, R Y Osamura

Abstract readComparative Study
In one paragraph

Article in British journal of cancer, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. ATAD3A: A Key Regulator of Mitochondria-Associated Diseases.International journal of molecular sciences · 2023
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Uterine adenosarcomas are mesenchymal neoplasms.The Journal of pathology · 2016
    Article
  13. Mitochondrial D310 mutation as clonal marker for solid tumors.Virchows Archiv : an international journal of pathology · 2015
    Article
  14. Article
  15. Small Circular DNAs in Human Pathology.The Malaysian journal of medical sciences : MJMS · 2014
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

S MasudaDepartment of Pathology, Nihon University School of Medicine, 30-1 Ohyaguchikami-cho, Itabashi-ku, Tokyo 173-8610, Japan. masuda.shinobu@nihon-u.ac.jp
T Kadowaki
N Kumaki
X Tang
Y Tokuda
S Yoshimura
S Takekoshi
R Y Osamura

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIt has been a challenge to determine breast cancer clonality accurately. The aim of the present study was to assess methods using formalin-fixed paraffin-embedded (FFPE) tissue to differentiate new primary tumours from true recurrences that are associated with poorer prognoses and often require more aggressive treatment.

methodsWe investigated the novel method of analysing gene alterations of mitochondrial DNA D-loop region (GAMDDL) and compared it with the conventional method of analysing the X-chromosome-linked human androgen receptor (HUMARA). The FFPE sections of primary and secondary breast cancers, the non-neoplastic mammary gland, and lymph nodes were examined.

resultsInformative rates for HUMARA, GAMDDL, and combined analyses were 42.1%, 76.9%, and 89.5%, respectively. All of the 10 contralateral breast cancers were determined to be non-clonal. In contrast, 3 out of 8 (37.5%) of the ipsilateral secondary tumours shared a clonal origin with the primary tumour and were classified as true recurrences, whereas 4 out of 8 (50%) were classified as new primary tumours.

conclusionGAMDDL analysis represents a novel and useful molecular method for examining the precise cell lineages of primary and secondary tumours, and was more accurate than HUMARA in determining clonality.

Indexed as

Clone CellsMutationAdultAgedBreast NeoplasmsChromosomes, Human, XDNA, MitochondrialFemaleFormaldehydeHumansLaser Capture MicrodissectionLymph NodesMammary Glands, HumanMiddle AgedNeoplasm Recurrence, LocalNeoplasms, Second PrimaryAR protein, humanDNA, MitochondrialFormaldehydeReceptors, Androgen

Identifiers

PMID23169290
PMCPMC3516690

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.