Evidence map›Paper›PMID 23167473›Full record

ArticleEuropean journal of oral sciences2012

Further evidence of association of the ABCA4 gene with cleft lip/palate.

Clarissa Fontoura, Renato M Silva, Jose M Granjeiro, Ariadne Letra

Open access · greenAbstract read
In one paragraph

Article in European journal of oral sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 3 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 3 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Review
  5. Association ofGenes · 2025
    Article
  6. Article
  7. Association of Single-Nucleotide Polymorphisms ofIndian journal of plastic surgery : official publication of the Association of Plastic Surgeons of India · 2022
    Article
  8. Association ofInternational journal of environmental research and public health · 2021
    Article
  9. Polymorphisms ofLife (Basel, Switzerland) · 2021
    Review
  10. Review
  11. Environmental mechanisms of orofacial clefts.Birth defects research · 2020
    Review
  12. Review
  13. Article
  14. Article
  15. Dental genetics in Brazil: Where we are.Molecular genetics & genomic medicine · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Clarissa FontouraDepartment of Cell and Molecular Biology, Fluminense Federal University, Niteroi, RJ, Brazil.
Renato M Silva
Jose M Granjeiro
Ariadne Letra
The University of Texas Health Science Center at Houston · USUniversidade Federal Fluminense · BR

Funding

Matrix Metalloproteinase Gene Variants and Cleft Lip and PalateR00DE018954 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LETRA, ARIADNE M · 2010 to 2012
$658k
NIDCR NIH HHS R00DE018913NIDCR NIH HHS R00 DE018954NIDCR NIH HHS R00DE018954
6 · The paper itself

Abstract

Non-syndromic cleft lip with or without cleft palate (CL/P) is a common birth defect with a complex etiology. Numerous genes and environmental factors, and their interactions, are thought to play a role in the susceptibility to CL/P. A recent genome-wide association study with several populations revealed markers in/near transcription factor vmaf musculoaponeurtoic fibrosarcoma oncogene homolog B (MAFB) and ATP-binding cassette sub-family A member 4 (ABCA4) genes as new susceptibility loci for CL/P. We hypothesized that these genes could also contribute to CL/P in a Brazilian population, and hence we evaluated if the associated single-nucleotide polymorphisms (SNPs) in MAFB (rs13041247 and rs11696257) and ABCA4 (rs560426 and rs481931) were associated with CL/P in our case-control data set. We genotyped 812 Caucasian individuals (400 cases and 412 controls) from Brazil. Allele frequencies were compared for cases and controls as well as for cleft subgroups and controls. ABCA4 rs540426 showed strong associations with CL/P, unilateral and right CL/P, and bilateral CL/P, whereas the SNP rs481931 showed borderline associations with CL/P and bilateral CL/P . No association was found for MAFB. Our results support a potential role for ABCA4 in the etiology of CL/P in individuals from Brazil.

Indexed as

AdolescentAdultATP-Binding Cassette TransportersBrazilCase-Control StudiesCleft LipCleft PalateFemaleGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansMafB Transcription FactorMalePolymorphism, Single NucleotideABCA4 protein, humanATP-Binding Cassette TransportersMafB Transcription Factor

Identifiers

PMID23167473
PMCPMC4438764
OpenAlexW1975535285

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.