Evidence map›Paper›PMID 23164059›Full record

ArticleVirology journal2012

Human immunodeficiency virus type 1 Vpu and cellular TASK proteins suppress transcription of unintegrated HIV-1 DNA.

Nkiruka Emeagwali, James E K Hildreth

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Nkiruka EmeagwaliCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, TN 37208, USA.
James E K Hildreth
Meharry Medical College · USUniversity of California, Davis · US

Funding

WALDEMAR POPIK, PHD, LAB STARTUP PACKAGE: HIVU54RR019192 · NCRR · MEHARRY MEDICAL COLLEGE · PI HILDRETH, JAMES E · 2003 to 2009
$10.3M
CYCLODEXTRIN AS NOVEL SPERMICIDE AND MICROBICIDER01HD040772 · NICHD · MEHARRY MEDICAL COLLEGE · PI HILDRETH, JAMES E · 2001 to 2009
$3.8M
HIV-1's Viral and Host Protein Interactions Determine the Site of Virion BuddingF31AI081484 · NIAID · MEHARRY MEDICAL COLLEGE · PI EMEAGWALI, NKIRUKA · 2009 to 2010
$74k
NCRR NIH HHS U54RR019192NIAID NIH HHS F31 1F31AI081484-01NICHD NIH HHS R01 HD40772
6 · The paper itself

Abstract

backgroundUnintegrated HIV-1 DNA serves as transcriptionally active templates in HIV-infected cells. Several host factors including NF-κβ enhance HIV-1 transcription. HIV-1 induced NF-κβ activation can be suppressed by viral protein U (Vpu). Interestingly HIV-1 Vpu shares amino acid homology with cellular Twik-related Acid Sensitive K+ (TASK) channel 1 and the proteins physically interact in cultured cells and AIDS lymphoid tissue. Furthermore, the first transmembrane domain of TASK-1 is functionally interchangeable with Vpu and like Vpu enhances HIV-1 release.

resultsHere we further characterize the role of TASK channels and Vpu in HIV-1 replication. We demonstrate that both TASK channels and Vpu can preferentially inhibit transcription of unintegrated HIV-1 DNA. Interestingly, TASK-1 ion channel function is not required and suppression of HIV-1 transcription by TASK-1 and Vpu was reversed by overexpression of RelA (NF-κβ p65).

conclusionTASK proteins and Vpu suppress transcription of unintegrated HIV-1 DNA through an NF-κβ-dependent mechanism. Taken together these findings support a possible physiological role for HIV-1 Vpu and TASK proteins as modulators of transcription of unintegrated HIV-1 DNA genomes.

Indexed as

Transcription, GeneticVirus IntegrationDNA, ViralGene Expression Regulation, ViralHEK293 CellsHIV-1HIV InfectionsHIV IntegraseHuman Immunodeficiency Virus ProteinsHumansIon ChannelsJurkat CellsNerve Tissue ProteinsPotassium Channels, Tandem Pore DomainTranscription Factor RelATransfectionDNA, ViralHIV IntegraseHuman Immunodeficiency Virus ProteinsIon ChannelsNerve Tissue ProteinsPotassium Channels, Tandem Pore Domainpotassium channel subfamily K member 3RELA protein, humanTranscription Factor RelAViral Regulatory and Accessory ProteinsViroporin Proteinsvpu protein, Human immunodeficiency virus 1

Identifiers

PMID23164059
PMCPMC3547713
OpenAlexW2110638475

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.