Evidence map›Paper›PMID 23162563›Full record

ArticleFrontiers in plant science2012

The putative K(+) channel subunit AtKCO3 forms stable dimers in Arabidopsis.

Alessandra Rocchetti, Tripti Sharma, Camilla Wulfetange, Joachim Scholz-Starke, Alexandra Grippa, Armando Carpaneto, Ingo Dreyer, Alessandro Vitale, Katrin Czempinski, Emanuela Pedrazzini

Abstract read
In one paragraph

Article in Frontiers in plant science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. New Insights into Plant TPK Ion Channel Evolution.Plants (Basel, Switzerland) · 2021
    Article
  4. Article
  5. Article
  6. TheFrontiers in plant science · 2018
    Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alessandra RocchettiIstituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche Milano, Italy.
Tripti Sharma
Camilla Wulfetange
Joachim Scholz-Starke
Alexandra Grippa
Armando Carpaneto
Ingo Dreyer
Alessandro Vitale
Katrin Czempinski
Emanuela Pedrazzini

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The permeation pore of K(+) channels is formed by four copies of the pore domain. AtKCO3 is the only putative voltage-independent K(+) channel subunit of Arabidopsis thaliana with a single pore domain. KCO3-like proteins recently emerged in evolution and, to date, have been found only in the genus Arabidopsis (A. thaliana and A. lyrata). We show that the absence of KCO3 does not cause marked changes in growth under various conditions. Only under osmotic stress we observed reduced root growth of the kco3-1 null-allele line. This phenotype was complemented by expressing a KCO3 mutant with an inactive pore, indicating that the function of KCO3 under osmotic stress does not depend on its direct ability to transport ions. Constitutively overexpressed AtKCO3 or AtKCO3::GFP are efficiently sorted to the tonoplast indicating that the protein is approved by the endoplasmic reticulum quality control. However, vacuoles isolated from transgenic plants do not have significant alterations in current density. Consistently, both AtKCO3 and AtKCO3::GFP are detected as homodimers upon velocity gradient centrifugation, an assembly state that would not allow for activity. We conclude that if AtKCO3 ever functions as a K(+) channel, active tetramers are held by particularly weak interactions, are formed only in unknown specific conditions and may require partner proteins.

Indexed as

Arabidopsismembrane proteinspotassium channelsprotein assemblytonoplast

Identifiers

PMID23162563
PMCPMC3495302

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.