Evidence map›Paper›PMID 23161680›Full record

ArticleNucleic acids research2013

TropGeneDB, the multi-tropical crop information system updated and extended.

Chantal Hamelin, Guilhem Sempere, Vincent Jouffe, Manuel Ruiz

Abstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Root Response to Drought Stress in Rice (International journal of molecular sciences · 2020
    Review
  7. The Sorghum QTL Atlas: a powerful tool for trait dissection, comparative genomics and crop improvement.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. The banana genome hub.Database : the journal of biological databases and curation · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Chantal HamelinCIRAD, UMR AGAP, F-34398 Montpellier, France. chantal.hamelin@cirad.fr
Guilhem Sempere
Vincent Jouffe
Manuel Ruiz

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TropGeneDB (http://tropgenedb.cirad.fr) was created to store genetic, molecular and phenotypic data on tropical crop species. The most common data stored in TropGeneDB are molecular markers, quantitative trait loci, genetic and physical maps, genetic diversity, phenotypic diversity studies and information on genetic resources (geographic origin, parentage, collection). TropGeneDB is organized on a crop basis with currently nine public modules (banana, cocoa, coconut, coffee, cotton, oil palm, rice, rubber tree, sugarcane). Crop-specific Web consultation interfaces have been designed to allow quick consultations and personalized complex queries. TropGeneDB is a component of the South Green Bioinformatics Platform (http://southgreen.cirad.fr/).

Indexed as

Databases, Nucleic AcidChromosome MappingCrops, AgriculturalGenes, PlantGenetic MarkersGenetic VariationInternetPhenotypeQuantitative Trait LociTropical ClimateUser-Computer InterfaceGenetic Markers

Identifiers

PMID23161680
PMCPMC3531089

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.