Evidence map›Paper›PMID 23161580›Full record

ArticleElectrophoresis2012

SILAC-based proteomic analysis to investigate the impact of amyloid precursor protein expression in neuronal-like B103 cells.

Dale Chaput, Lisa Hornbeck Kirouac, Harris Bell-Temin, Stanley M Stevens, Jaya Padmanabhan

Abstract read
In one paragraph

Article in Electrophoresis, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. ACS chemical biology · 2022
    Article
  4. Baicalin Attenuated ABioMed research international · 2022
    Article
  5. Article
  6. Alzheimer's Disease and Protein Kinases.Advances in experimental medicine and biology · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Dale ChaputDepartment of Cell Biology, Microbiology, and Molecular Biology, University of South Florida, Tampa, FL, USA.
Lisa Hornbeck Kirouac
Harris Bell-Temin
Stanley M Stevens
Jaya Padmanabhan
University of South Florida · USUSF Health Byrd Alzheimer's Institute · US

Funding

Regulatory functions of alpha 1-antichymotrypsin in inflammation and Alzheimer'sR21AG031429 · NIA · UNIVERSITY OF SOUTH FLORIDA · PI PADMANABHAN, JAYA · 2010 to 2011
$326k
NIA NIH HHS 1R21AG031429-01A2NIA NIH HHS R21 AG031429
6 · The paper itself

Abstract

Alzheimer's disease (AD) is the most prevalent form of dementia in the elderly. Amyloid plaque formation through aggregation of the amyloid beta peptide derived from amyloid precursor protein (APP) is considered one of the hallmark processes leading to AD pathology; however, the precise role of APP in plaque formation and AD pathogenesis is yet to be determined. Using stable isotope labeling by amino acids in cell culture (SILAC) and MS, protein expression profiles of APP null, rat neuronal-like B103 cells were compared to B103-695 cells that express the APP isoform, APP-695. A total of 2979 unique protein groups were identified among three biological replicates and significant protein expression changes were identified in a total of 102 nonredundant proteins. Some of the top biological functions associated with the differentially expressed proteins identified include cellular assembly, organization and morphology, cell cycle, lipid metabolism, protein folding, and PTMs. We report several novel biological pathways influenced by APP-695 expression in neuronal-like cells and provide additional framework for investigating altered molecular mechanisms associated with APP expression and processing and contribution to AD pathology.

Indexed as

Amyloid beta-Protein PrecursorAnimalsCell Line, TumorImmunoblottingIsotope LabelingMass SpectrometryMicroscopy, FluorescenceNeuronsProteinsProteomeProteomicsRatsSignal TransductionAmyloid beta-Protein PrecursorProteinsProteome

Identifiers

PMID23161580
PMCPMC3604657
OpenAlexW1938649209

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.