Evidence map›Paper›PMID 23160806›Full record

ArticleCell stress & chaperones2013

Functional relevance of J-protein family of rice (Oryza sativa).

Neelam K Sarkar, Upasna Thapar, Preeti Kundnani, Priyankar Panwar, Anil Grover

Open access · bronzeAbstract read
In one paragraph

Article in Cell stress & chaperones, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 62 citations in OpenAlex.

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  7. International journal of molecular sciences · 2024
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  8. Genome-Wide Identification and Analysis of MaizePlants (Basel, Switzerland) · 2024
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  9. DNAJ protein gene expansion mechanism in Panicoideae and PgDNAJ functional identification in pearl millet.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  10. Article
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  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. The expanding world of plant J-domain proteins.Critical reviews in plant sciences · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Neelam K SarkarDepartment of Plant Molecular Biology, University of Delhi South Campus, New Delhi, 110021, India.
Upasna Thapar
Preeti Kundnani
Priyankar Panwar
Anil Grover
University of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein folding and disaggregation are crucial processes for survival of cells under unfavorable conditions. A network of molecular chaperones supports these processes. Collaborative action of Hsp70 and Hsp100 proteins is an important component of this network. J-proteins/DnaJ members as co-chaperones assist Hsp70. As against 22 DnaJ sequences noted in yeast, rice genome contains 104 J-genes. Rice J-genes were systematically classified into type A (12 sequences), type B (9 sequences), and type C (83 sequences) classes and a scheme of nomenclature of these proteins is proposed. Transcript expression profiles revealed that J-proteins are possibly involved in basal cellular activities, developmental programs, and in stress. Ydj1 is the most abundant J-protein in yeast. Ydj1 deleted yeast cells are nonviable at 37 °C. Two rice ortholog proteins of yeast Ydj1 protein namely OsDjA4 and OsDjA5 successfully rescued the growth defect in mutant yeast. As Hsp70 and J-proteins work in conjunction, it emerges that rice J-proteins can partner with yeast Hsp70 proteins in functioning. It is thus shown that J-protein machine is highly conserved.

Indexed as

Multigene FamilyArabidopsisComputer SimulationGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantGenetic Complementation TestHeat-Shock ResponseMutationOryzaPhylogenyPlant ProteinsProtein BindingSaccharomyces cerevisiaeStress, PhysiologicalTerminology as TopicPlant Proteins

Identifiers

PMID23160806
PMCPMC3631087
OpenAlexW1980552190

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.