Evidence map›Paper›PMID 23160491›Full record

ArticleNature2012

Fucose sensing regulates bacterial intestinal colonization.

Alline R Pacheco, Meredith M Curtis, Jennifer M Ritchie, Diana Munera, Matthew K Waldor, Cristiano G Moreira, Vanessa Sperandio

Open access · greenAbstract read
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 299 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
299citing papers in PubMed, 1 pooled it
18.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

299 citing papers in PubMed, 1 synthesis or guideline pooled it, 494 citations in OpenAlex.

  1. Association of Fucosyltransferase 2 Gene Variant with Inflammatory Bowel Diseases: A Meta-Analysis.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Pooled it
  2. Trial
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. L-Fucose-Dependent Biofilm Formation bybioRxiv : the preprint server for biology · 2026
    Article
  11. EnterohemorrhagiciScience · 2026
    Article
  12. Catabolism of serine enantiomers represses enterohemorrhagicProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Gut microbes · 2025
    Article
  18. Article
  19. Article
  20. Article

239 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Alline R PachecoDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9048, USA.
Meredith M Curtis
Jennifer M Ritchie
Diana Munera
Matthew K Waldor
Cristiano G Moreira
Vanessa Sperandio
The University of Texas Southwestern Medical Center · USBrigham and Women's Hospital · USHarvard University · US

Funding

Vibrio cholerae intestinal colonization and vaccine developmentR01AI042347 · NIAID · TUFTS UNIVERSITY BOSTON · PI WALDOR, MATTHEW K · 1998 to 2025
$7.3M
MOLECULAR MICROBIOLOGY TRAINING GRANTT32AI007520 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Julie K Pfeiffer · 1997 to 2026
$7.0M
AI-3 Inhibitors as treatment for bacterial infectionsU01AI077853 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI SPERANDIO, VANESSA · 2008 to 2012
$6.5M
Quorum sensing regulation of EHEC virulence genesR01AI053067 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI SPERANDIO, VANESSA · 2003 to 2017
$6.3M
Quorum Sensing Regulation of EHEC Virulence GenesR37AI053067 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI VANESSA SPERANDIO · 2018 to 2026
$5.3M
Molecular Biology and Virulence of CTX PhageR37AI042347 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI WALDOR, MATTHEW K · 2008 to 2017
$3.8M
SdiA regulation of EHEC virulenceR01AI077613 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI SPERANDIO, VANESSA · 2009 to 2017
$3.4M
NIAID NIH HHS 5 T32 AI7520-14NIAID NIH HHS AI053067NIAID NIH HHS AI077613NIAID NIH HHS AI42347NIAID NIH HHS AI77853NIAID NIH HHS R01 AI053067NIAID NIH HHS R01 AI077613NIAID NIH HHS R37 AI042347NIAID NIH HHS R37 AI053067NIAID NIH HHS T32 AI007520NIAID NIH HHS U01 AI077853
6 · The paper itself

Abstract

The mammalian gastrointestinal tract provides a complex and competitive environment for the microbiota. Successful colonization by pathogens requires scavenging nutrients, sensing chemical signals, competing with the resident bacteria and precisely regulating the expression of virulence genes. The gastrointestinal pathogen enterohaemorrhagic Escherichia coli (EHEC) relies on inter-kingdom chemical sensing systems to regulate virulence gene expression. Here we show that these systems control the expression of a novel two-component signal transduction system, named FusKR, where FusK is the histidine sensor kinase and FusR the response regulator. FusK senses fucose and controls expression of virulence and metabolic genes. This fucose-sensing system is required for robust EHEC colonization of the mammalian intestine. Fucose is highly abundant in the intestine. Bacteroides thetaiotaomicron produces multiple fucosidases that cleave fucose from host glycans, resulting in high fucose availability in the gut lumen. During growth in mucin, B. thetaiotaomicron contributes to EHEC virulence by cleaving fucose from mucin, thereby activating the FusKR signalling cascade, modulating the virulence gene expression of EHEC. Our findings suggest that EHEC uses fucose, a host-derived signal made available by the microbiota, to modulate EHEC pathogenicity and metabolism.

Indexed as

alpha-L-FucosidaseAnimalsBacterial ProteinsBacteroidesEnterohemorrhagic Escherichia coliEscherichia coli ProteinsFucoseGastrointestinal TractGene Expression Regulation, BacterialMucinsProtein KinasesRabbitsReceptors, AdrenergicSignal TransductionTranscription FactorsVirulencealpha-L-FucosidaseBacterial ProteinsEscherichia coli ProteinsFucoseFusK protein, E coliFusR protein, E coliMucinsProtein KinasesQseC protein, E coliQseE protein, E coliReceptors, AdrenergicTranscription FactorsVirulence Factors

Identifiers

PMID23160491
PMCPMC3518558
OpenAlexW2100415806

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.