Evidence map›Paper›PMID 23157387›Full record

ArticleMolecular plant pathology2013

AsnB, regulated by diffusible signal factor and global regulator Clp, is involved in aspartate metabolism, resistance to oxidative stress and virulence in Xanthomonas oryzae pv. oryzicola.

Guoliang Qian, Chunhui Liu, Guichun Wu, Fangqun Yin, Yancun Zhao, Yijing Zhou, Yanbing Zhang, Zhiwei Song, Jiaqin Fan, Baishi Hu and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Antibacterial activity of peptaibols fromFrontiers in microbiology · 2022
    Article
  9. Article
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  11. Genome-Scale Metabolic Model ofFrontiers in genetics · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. XocR, a LuxR solo required for virulence in Xanthomonas oryzae pv. oryzicola.Frontiers in cellular and infection microbiology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Guoliang QianCollege of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China.
Chunhui Liu
Guichun Wu
Fangqun Yin
Yancun Zhao
Yijing Zhou
Yanbing Zhang
Zhiwei Song
Jiaqin Fan
Baishi Hu
Fengquan Liu
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzicola (Xoc) causes bacterial leaf streak in rice, which is a destructive disease worldwide. Xoc virulence factors are regulated by diffusible signal factor (DSF) and the global regulator Clp. In this study, we have demonstrated that asnB (XOC_3054), encoding an asparagine synthetase, is a novel virulence-related gene regulated by both DSF and Clp in Xoc. A sequence analysis revealed that AsnB is highly conserved in Xanthomonas. An asnB mutation in Xoc dramatically impaired pathogen virulence and growth rate in host rice, but did not affect the ability to trigger the hypersensitive response in nonhost (plant) tobacco. Compared with the wild-type strain, the asnB deletion mutant was unable to grow in basic MMX (-) medium (a minimal medium without ammonium sulphate as the nitrogen source) with or without 10 tested nitrogen sources, except asparagine. The disruption of asnB impaired pathogen resistance to oxidative stress and reduced the transcriptional expression of oxyR, katA and katG, which encode three important proteins responsible for hydrogen peroxide (H(2)O(2)) sensing and detoxification in Xanthomonas in the presence of H(2)O(2), and nine important known Xoc virulence-related genes in plant cell-mimicking medium. Furthermore, the asnB mutation did not affect extracellular protease activity, extracellular polysaccharide production, motility or chemotaxis. Taken together, our results demonstrate the role of asnB in Xanthomonas for the first time.

Indexed as

Oxidative StressAspartic AcidBacterial ProteinsChemotaxisCulture MediaDiffusionDisease ResistanceGene Expression Regulation, BacterialGenes, BacterialHydrogen PeroxideMutationNicotianaOryzaPeptide HydrolasesPhysical Chromosome MappingPlant DiseasesAspartic AcidBacterial ProteinsCulture MediaHydrogen PeroxidePeptide HydrolasesPlant Extracts

Identifiers

PMID23157387
PMCPMC6638903
OpenAlexW1927064443

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.