Evidence map›Paper›PMID 23154535›Full record

ArticlePlant physiology2013

Regulation of miR399f transcription by AtMYB2 affects phosphate starvation responses in Arabidopsis.

Dongwon Baek, Min Chul Kim, Hyun Jin Chun, Songhwa Kang, Hyeong Cheol Park, Gilok Shin, Jiyoung Park, Mingzhe Shen, Hyewon Hong, Woe-Yeon Kim and 5 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 169 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Molecular Mechanisms of Phosphate Use Efficiency inInternational journal of molecular sciences · 2024
    Article
  8. Review
  9. Opportunity for genome engineering to enhance phosphate homeostasis in crops.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  10. Article
  11. Overexpression ofInternational journal of molecular sciences · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. International journal of molecular sciences · 2023
    Article
  18. Article
  19. Article
  20. Prospects of genetics and breeding for low-phosphate tolerance: an integrated approach from soil to cell.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Dongwon BaekDivision of Applied Life Science-BK21 Program, Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.
Min Chul Kim
Hyun Jin Chun
Songhwa Kang
Hyeong Cheol Park
Gilok Shin
Jiyoung Park
Mingzhe Shen
Hyewon Hong
Woe-Yeon Kim
Doh Hoon Kim
Sang Yeol Lee
Ray A Bressan
Hans J Bohnert
Dae-Jin Yun
Gyeongsang National University · KRDong-A University · KRKing Abdulaziz University · SAUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although a role for microRNA399 (miR399) in plant responses to phosphate (Pi) starvation has been indicated, the regulatory mechanism underlying miR399 gene expression is not clear. Here, we report that AtMYB2 functions as a direct transcriptional activator for miR399 in Arabidopsis (Arabidopsis thaliana) Pi starvation signaling. Compared with untransformed control plants, transgenic plants constitutively overexpressing AtMYB2 showed increased miR399f expression and tissue Pi contents under high Pi growth and exhibited elevated expression of a subset of Pi starvation-induced genes. Pi starvation-induced root architectural changes were more exaggerated in AtMYB2-overexpressing transgenic plants compared with the wild type. AtMYB2 directly binds to a MYB-binding site in the miR399f promoter in vitro, as well as in vivo, and stimulates miR399f promoter activity in Arabidopsis protoplasts. Transcription of AtMYB2 itself is induced in response to Pi deficiency, and the tissue expression patterns of miR399f and AtMYB2 are similar. Both genes are expressed mainly in vascular tissues of cotyledons and in roots. Our results suggest that AtMYB2 regulates plant responses to Pi starvation by regulating the expression of the miR399 gene.

Indexed as

Transcriptional ActivationAgrobacterium tumefaciensArabidopsisArabidopsis ProteinsBinding SitesChromatin ImmunoprecipitationCotyledonGene Expression Regulation, PlantGenes, PlantMicroRNAsPhosphatesPlant RootsPlants, Genetically ModifiedPotassium CompoundsPromoter Regions, GeneticProtein BindingArabidopsis ProteinsMicroRNAsMYB2 protein, ArabidopsisPhosphatesPotassium Compoundspotassium phosphateRNA, PlantTrans-Activators

Identifiers

PMID23154535
PMCPMC3532267
OpenAlexW2073579158

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.