Evidence map›Paper›PMID 23154386›Full record

ArticleThe Analyst2013

Capillary electrophoresis with three-color fluorescence detection for the analysis of glycosphingolipid metabolism.

Richard B Keithley, Alison S Rosenthal, David C Essaka, Hidenori Tanaka, Yayoi Yoshimura, Monica M Palcic, Ole Hindsgaul, Norman J Dovichi

Abstract read
In one paragraph

Article in The Analyst, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. The Journal of organic chemistry · 2024
    Article
  2. Analytical Techniques for Single-Cell Biochemical Assays of Lipids.Annual review of biomedical engineering · 2023
    Review
  3. Article
  4. Article
  5. Review
  6. Preserving Single Cells in Space and Time for Analytical Assays.Trends in analytical chemistry : TRAC · 2020
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Richard B KeithleyDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
Alison S Rosenthal
David C Essaka
Hidenori Tanaka
Yayoi Yoshimura
Monica M Palcic
Ole Hindsgaul
Norman J Dovichi

Funding

Glycolipid metabolism in single cellsR01NS061767 · NINDS · UNIVERSITY OF WASHINGTON · PI DOVICHI, NORMAN J · 2007 to 2011
$1.8M
NINDS NIH HHS R01 NS061767NINDS NIH HHS R01NS061767
6 · The paper itself

Abstract

A capillary electrophoresis system with an ultrasensitive three-color laser-induced fluorescence detector was constructed for the simultaneous measurement of glycosphingolipids conjugated with a family of BODIPY fluorophores. The compounds were separated by capillary electrophoresis and detected by laser-induced fluorescence excited within a sheath-flow cuvette. Diode-pumped solid-state lasers operating at 473 nm and 532 nm, and a diode laser operating at 633 nm were used to excite glycosphingolipids tagged with BODIPY-FL, BODIPY-TMR, and BODIPY-650/665 fluorophores. Detection limits were 34 ± 1 molecules, 67 ± 7 molecules, and 36 ± 13 molecules of BODIPY-FL, BODIPY-TMR, and BODIPY-650/665 labeled glycosphingolipids. Separation efficiencies were typically one million theoretical plates. To test the ability of the system to analyze cellular contents in an in vitro biological model, differentiated PC12 cells were co-incubated with BODIPY-FL, BODIPY-TMR, and BODIPY-650/665 labeled lactosylceramide substrates. Cells were homogenized. The metabolic products originating from the glycosphingolipid substrates were simultaneously analyzed using the system.

Indexed as

AnimalsBoron CompoundsColorElectrophoresis, CapillaryGlycosphingolipidsLasersPC12 CellsRatsSpectrometry, Fluorescence4,4-difluoro-4-bora-3a,4a-diaza-s-indaceneBoron CompoundsGlycosphingolipids

Identifiers

PMID23154386
PMCPMC3509344

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.