Evidence map›Paper›PMID 23153095›Full record

ArticleJournal of proteome research2012

Proteome analysis of Cry4Ba toxin-interacting Aedes aegypti lipid rafts using geLC-MS/MS.

Krishnareddy Bayyareddy, Xiang Zhu, Ron Orlando, Michael J Adang

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Krishnareddy BayyareddyDepartment of Entomology, Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602, United States.
Xiang Zhu
Ron Orlando
Michael J Adang
University of Georgia · US

Funding

Functional Domains of Bacillus thuringiensis EndotoxinsR01AI029092 · NIAID · OHIO STATE UNIVERSITY · PI DEAN, DONALD H · 1989 to 2007
$2.8M
NIAID NIH HHS R01 AI029092NIAID NIH HHS R01 AI 29092
6 · The paper itself

Abstract

Lipid rafts are microdomains in the plasma membrane of eukaryotic cells. Among their many functions, lipid rafts are involved in cell toxicity caused by pore forming bacterial toxins including Bacillus thuringiensis (Bt) Cry toxins. We isolated lipid rafts from brush border membrane vesicles (BBMV) of Aedes aegypti larvae as a detergent resistant membrane (DRM) fraction on density gradients. Cholesterol, aminopeptidase (APN), alkaline phosphatase (ALP) and the raft marker flotillin were preferentially partitioned into the lipid raft fraction. When mosquitocidal Cry4Ba toxin was preincubated with BBMV, Cry4Ba localized to lipid rafts. A proteomic approach based on one-dimensional gel electrophoresis, in-gel trypsin digestion, followed by liquid chromatography-mass spectrometry (geLC-MS/MS) identified a total of 386 proteins. Of which many are typical lipid raft marker proteins including flotillins and glycosylphosphatidylinositol (GPI)-anchored proteins. Identified raft proteins were annotated in silico for functional and physicochemical characteristics. Parameters such as distribution of isoelectric point, molecular mass, and predicted post-translational modifications relevant to lipid raft proteins (GPI anchorage and myristoylation or palmitoylation) were analyzed for identified proteins in the DRM fraction. From a functional point of view, this study identified proteins implicated in Cry toxin interactions as well as membrane-associated proteins expressed in the mosquito midgut that have potential relevance to mosquito biology and vector management.

Indexed as

AedesAlkaline PhosphataseAminopeptidasesAnimalsBacillus thuringiensis ToxinsBacterial ProteinsChromatography, LiquidDetergentsElectrophoresis, Polyacrylamide GelEndotoxinsEscherichia coliGlycosylphosphatidylinositolsHemolysin ProteinsIsoelectric PointLarvaMembrane MicrodomainsAlkaline PhosphataseAminopeptidasesBacillus thuringiensis ToxinsBacterial ProteinsDetergentsEndotoxinsflotillinsGlycosylphosphatidylinositolsHemolysin Proteinsinsecticidal crystal protein, Bacillus ThuringiensisMembrane ProteinsOctoxynolProteomeReceptors, Cell Surface

Identifiers

PMID23153095
PMCPMC3556785
OpenAlexW1974362604

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.